| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210364
Identifier: 28210364
GI number: 28210364
Start: 653501
End: 655198
Strand: Direct
Name: 28210364
Synonym: CTC00635
Alternate gene names: NA
Gene position: 653501-655198 (Clockwise)
Preceding gene: 28210363
Following gene: 28210366
Centisome position: 23.35
GC content: 26.5
Gene sequence:
>1698_bases ATGGAAGATTTTAAAATATTGAAGTTTGTTGATAAATTTAAATTTATATATGAGAAACTTGGTGTCAATTATTCTTCCAT GAGAACAATACTTAAATTAAAGCTTTTAATGGATAGTAGAAGAGTTCCAACAATATATAAAGATAGGGAAAATGAGGACA AAAAGAATACTCTTAAAAAATCACTGCTTTTATATGGATTAATGGGAGTGTTTCTTATGGTTTTTATTTTTATTCCATCG CCTATGGTTGTAAAAATGAGTATAAATATAGGTGCCATAATGTTTTTAATCATGAGTACCATGATCGCAGATTTTTCTTC TGTACTTTTGGATATCCGTGATAAGAATATATTAAATACTAAACCATTAGATCCCAAAACAATAAATGCAGCTAGGACTA CTCATATATTAATTTATATTACATCTATTTCCGGGGCAATTGCAGGGCCAACCTTAATAGGGGGACTTATTAAATATAAA TTTAAGTTTTTTATAATTTTCTTTTTTCAAATAATATTGCTTTCATTTTTTACAATCTTCATAACTTCCATATTGTATTA TTTTATATTAAAAATTTTTGATGGAGAAAAGCTTAAAGATATAATAAATTATTTTCAAATAGTGCTATCAATAGTGCTTG CTATAGGATATCAAATTATACCAAGAGTATTTGATTTTACTGGTATAAATATGAATTTTAAAATTAAATGGTGGAGTTAT TTAGTTCCACCAGTATGGTTTGCAGCGCCATATAGCTTAATAATGGAACATAATACAGGAAGAGAGTATGTGCTGCTAAG CATAATGTGCGTGGCTATACCAATTATAATTTTTGGTGTATACTATAAATTTATTGTGCCTTATTTTGAAGAAAATTTGC AAAAACTTGATAGTAGTATAAGTAAAAAAGGAAGCTTTGAAGAAACTAAAGGGGTAAGGCATAAAAGATATGCATCTATT TTTTGTAGAGATAAAATAGAAAATGTATTTTTTCGTTTTTCAAGAAACATGATATCTACAGAAAGAAAGTTGAAGCTAAA ATTGTATCCTACTTTGGCTTTTGCTGTGATTTTTCCTTTCATAATATTTATAGGCTTTTTTTCAAAAAATGAATCAGTTT CACAGGCATTTAATGAATTTTCAAAAGGAAATTATTATTTTTCAATTTATTTATCAATACTTATGTTGACAGCAAGTATA GAGCTTTTAAGTCAAAGTGAAAAATATAAGGGAGCATGGATATACAAGGTTTTACCTATAGATAAGCCAGGGAAAATACA AAAAGGAGTTTTAAAAGGATTTATATTAAGATACATTTTCCCAGTATTTTGTAGTATTTGTATTGTTTTCTTAATAATAT GTGGATTAAGAATATTACCAGATATAATAGTAATGTTTTTGAGTATGCTGATTCTAATAGTTGTTATGCAAAGCTTATAT AAAAAAGAATTGCCTTTTTATAAGGATTTCCAAAGTAATGGAGGAAATTCTATTATTACATTTGTAGTTTCCGCAGGCCT TACAGGAATCTTTTTTGGATTGCATAAATTAATTAGAAGTTTGATAGAATATAATTTTGCTATTTATATATACATGGGAA TTTTGATTATAATTAATATAATCTTATGGAAAATAATATTTAATATAAGTTGGAAGCAAGTTCAACTGGAGGATGCACGA GAATCTCAGAAAGTATAA
Upstream 100 bases:
>100_bases TGGAAGGCTCTCTTGAACAAATTTTTAATCAAATAACCGGATTTACAAAGCATGAAGAGATTGCAAATGAATTTATCTCC ATACTAAAGGAGGTATAGAA
Downstream 100 bases:
>100_bases ATAAAAAGAAAAAGTGCTACTCTTTACTGGATGGAGCACTTTTTTTTCCTTTTAACTTATATATCAACACCAAGGAATCT AATACTGATTTTTAAATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 565; Mature: 565
Protein sequence:
>565_residues MEDFKILKFVDKFKFIYEKLGVNYSSMRTILKLKLLMDSRRVPTIYKDRENEDKKNTLKKSLLLYGLMGVFLMVFIFIPS PMVVKMSINIGAIMFLIMSTMIADFSSVLLDIRDKNILNTKPLDPKTINAARTTHILIYITSISGAIAGPTLIGGLIKYK FKFFIIFFFQIILLSFFTIFITSILYYFILKIFDGEKLKDIINYFQIVLSIVLAIGYQIIPRVFDFTGINMNFKIKWWSY LVPPVWFAAPYSLIMEHNTGREYVLLSIMCVAIPIIIFGVYYKFIVPYFEENLQKLDSSISKKGSFEETKGVRHKRYASI FCRDKIENVFFRFSRNMISTERKLKLKLYPTLAFAVIFPFIIFIGFFSKNESVSQAFNEFSKGNYYFSIYLSILMLTASI ELLSQSEKYKGAWIYKVLPIDKPGKIQKGVLKGFILRYIFPVFCSICIVFLIICGLRILPDIIVMFLSMLILIVVMQSLY KKELPFYKDFQSNGGNSIITFVVSAGLTGIFFGLHKLIRSLIEYNFAIYIYMGILIIINIILWKIIFNISWKQVQLEDAR ESQKV
Sequences:
>Translated_565_residues MEDFKILKFVDKFKFIYEKLGVNYSSMRTILKLKLLMDSRRVPTIYKDRENEDKKNTLKKSLLLYGLMGVFLMVFIFIPS PMVVKMSINIGAIMFLIMSTMIADFSSVLLDIRDKNILNTKPLDPKTINAARTTHILIYITSISGAIAGPTLIGGLIKYK FKFFIIFFFQIILLSFFTIFITSILYYFILKIFDGEKLKDIINYFQIVLSIVLAIGYQIIPRVFDFTGINMNFKIKWWSY LVPPVWFAAPYSLIMEHNTGREYVLLSIMCVAIPIIIFGVYYKFIVPYFEENLQKLDSSISKKGSFEETKGVRHKRYASI FCRDKIENVFFRFSRNMISTERKLKLKLYPTLAFAVIFPFIIFIGFFSKNESVSQAFNEFSKGNYYFSIYLSILMLTASI ELLSQSEKYKGAWIYKVLPIDKPGKIQKGVLKGFILRYIFPVFCSICIVFLIICGLRILPDIIVMFLSMLILIVVMQSLY KKELPFYKDFQSNGGNSIITFVVSAGLTGIFFGLHKLIRSLIEYNFAIYIYMGILIIINIILWKIIFNISWKQVQLEDAR ESQKV >Mature_565_residues MEDFKILKFVDKFKFIYEKLGVNYSSMRTILKLKLLMDSRRVPTIYKDRENEDKKNTLKKSLLLYGLMGVFLMVFIFIPS PMVVKMSINIGAIMFLIMSTMIADFSSVLLDIRDKNILNTKPLDPKTINAARTTHILIYITSISGAIAGPTLIGGLIKYK FKFFIIFFFQIILLSFFTIFITSILYYFILKIFDGEKLKDIINYFQIVLSIVLAIGYQIIPRVFDFTGINMNFKIKWWSY LVPPVWFAAPYSLIMEHNTGREYVLLSIMCVAIPIIIFGVYYKFIVPYFEENLQKLDSSISKKGSFEETKGVRHKRYASI FCRDKIENVFFRFSRNMISTERKLKLKLYPTLAFAVIFPFIIFIGFFSKNESVSQAFNEFSKGNYYFSIYLSILMLTASI ELLSQSEKYKGAWIYKVLPIDKPGKIQKGVLKGFILRYIFPVFCSICIVFLIICGLRILPDIIVMFLSMLILIVVMQSLY KKELPFYKDFQSNGGNSIITFVVSAGLTGIFFGLHKLIRSLIEYNFAIYIYMGILIIINIILWKIIFNISWKQVQLEDAR ESQKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65703; Mature: 65703
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDFKILKFVDKFKFIYEKLGVNYSSMRTILKLKLLMDSRRVPTIYKDRENEDKKNTLKK CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH SLLLYGLMGVFLMVFIFIPSPMVVKMSINIGAIMFLIMSTMIADFSSVLLDIRDKNILNT HHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC KPLDPKTINAARTTHILIYITSISGAIAGPTLIGGLIKYKFKFFIIFFFQIILLSFFTIF CCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITSILYYFILKIFDGEKLKDIINYFQIVLSIVLAIGYQIIPRVFDFTGINMNFKIKWWSY HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHH LVPPVWFAAPYSLIMEHNTGREYVLLSIMCVAIPIIIFGVYYKFIVPYFEENLQKLDSSI HCCHHHHHCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKKGSFEETKGVRHKRYASIFCRDKIENVFFRFSRNMISTERKLKLKLYPTLAFAVIFPF HCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEHHHHHHHHHHHH IIFIGFFSKNESVSQAFNEFSKGNYYFSIYLSILMLTASIELLSQSEKYKGAWIYKVLPI HHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC DKPGKIQKGVLKGFILRYIFPVFCSICIVFLIICGLRILPDIIVMFLSMLILIVVMQSLY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKELPFYKDFQSNGGNSIITFVVSAGLTGIFFGLHKLIRSLIEYNFAIYIYMGILIIINI HHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILWKIIFNISWKQVQLEDARESQKV HHHHHHHCCCHHEEEHHHHHCCCCC >Mature Secondary Structure MEDFKILKFVDKFKFIYEKLGVNYSSMRTILKLKLLMDSRRVPTIYKDRENEDKKNTLKK CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH SLLLYGLMGVFLMVFIFIPSPMVVKMSINIGAIMFLIMSTMIADFSSVLLDIRDKNILNT HHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC KPLDPKTINAARTTHILIYITSISGAIAGPTLIGGLIKYKFKFFIIFFFQIILLSFFTIF CCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITSILYYFILKIFDGEKLKDIINYFQIVLSIVLAIGYQIIPRVFDFTGINMNFKIKWWSY HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHH LVPPVWFAAPYSLIMEHNTGREYVLLSIMCVAIPIIIFGVYYKFIVPYFEENLQKLDSSI HCCHHHHHCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKKGSFEETKGVRHKRYASIFCRDKIENVFFRFSRNMISTERKLKLKLYPTLAFAVIFPF HCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEHHHHHHHHHHHH IIFIGFFSKNESVSQAFNEFSKGNYYFSIYLSILMLTASIELLSQSEKYKGAWIYKVLPI HHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC DKPGKIQKGVLKGFILRYIFPVFCSICIVFLIICGLRILPDIIVMFLSMLILIVVMQSLY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKELPFYKDFQSNGGNSIITFVVSAGLTGIFFGLHKLIRSLIEYNFAIYIYMGILIIINI HHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILWKIIFNISWKQVQLEDARESQKV HHHHHHHCCCHHEEEHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA