| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210367
Identifier: 28210367
GI number: 28210367
Start: 657839
End: 658228
Strand: Direct
Name: 28210367
Synonym: CTC00638
Alternate gene names: NA
Gene position: 657839-658228 (Clockwise)
Preceding gene: 28210366
Following gene: 28210368
Centisome position: 23.5
GC content: 25.38
Gene sequence:
>390_bases TTGGAAACCAATTTATCATATTTGGAAACAGTGACTAAGATACATAATATTATATTTCAAGAAATAGGTGTTGAATTATC AGCCATCATAAAAACAAAAGAAGAAATTGCAATTGAAGAAAATCCATTTGATGATTCTTATGATTTTTCAAGAATTCATT TGGTTTTTACCAATAATCAAATAGATAATATAAAAGTTAAAAAGTTAAAAGAGACTGTTTTTGAAGGTGAAATTTTTAGT GCTGGTAACGAGTGCTTTTATATGTACTTGCCCAGATATGCTACAAAGAAAAGACTGAATAATAATTATTTGGAAATACA AATGGATATCATTGCAACAACAATAAAATTAAGTGTAGTTAAAAGATTATATGATATGTTGGATTGTTAA
Upstream 100 bases:
>100_bases GGGAAAAATAGAATACCTAAAATGACATGTTTAGTTGAAATACTAAAAAAATGCAGGCTTTGAACATGTACAAACATATA TTCAAAGTGGGAATATATTA
Downstream 100 bases:
>100_bases TTTTAATGCTAACTGTTAGGTTATGAACATAATACAAATTGTCAAATAGTAATTTGATGTACAGGTTATTAATAATCTTT CAGACAAGACAAAACATAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues METNLSYLETVTKIHNIIFQEIGVELSAIIKTKEEIAIEENPFDDSYDFSRIHLVFTNNQIDNIKVKKLKETVFEGEIFS AGNECFYMYLPRYATKKRLNNNYLEIQMDIIATTIKLSVVKRLYDMLDC
Sequences:
>Translated_129_residues METNLSYLETVTKIHNIIFQEIGVELSAIIKTKEEIAIEENPFDDSYDFSRIHLVFTNNQIDNIKVKKLKETVFEGEIFS AGNECFYMYLPRYATKKRLNNNYLEIQMDIIATTIKLSVVKRLYDMLDC >Mature_129_residues METNLSYLETVTKIHNIIFQEIGVELSAIIKTKEEIAIEENPFDDSYDFSRIHLVFTNNQIDNIKVKKLKETVFEGEIFS AGNECFYMYLPRYATKKRLNNNYLEIQMDIIATTIKLSVVKRLYDMLDC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15143; Mature: 15143
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METNLSYLETVTKIHNIIFQEIGVELSAIIKTKEEIAIEENPFDDSYDFSRIHLVFTNNQ CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCCCCCCCEEEEEEEECCC IDNIKVKKLKETVFEGEIFSAGNECFYMYLPRYATKKRLNNNYLEIQMDIIATTIKLSVV CCCCHHHHHHHHHHCCHHCCCCCCEEEEECCCHHHHHHCCCCEEEEEHHHHHHHHHHHHH KRLYDMLDC HHHHHHHCC >Mature Secondary Structure METNLSYLETVTKIHNIIFQEIGVELSAIIKTKEEIAIEENPFDDSYDFSRIHLVFTNNQ CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCCCCCCCEEEEEEEECCC IDNIKVKKLKETVFEGEIFSAGNECFYMYLPRYATKKRLNNNYLEIQMDIIATTIKLSVV CCCCHHHHHHHHHHCCHHCCCCCCEEEEECCCHHHHHHCCCCEEEEEHHHHHHHHHHHHH KRLYDMLDC HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA