| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
Click here to switch to the map view.
The map label for this gene is 28210320
Identifier: 28210320
GI number: 28210320
Start: 609771
End: 610280
Strand: Direct
Name: 28210320
Synonym: CTC00585
Alternate gene names: NA
Gene position: 609771-610280 (Clockwise)
Preceding gene: 28210316
Following gene: 28210321
Centisome position: 21.78
GC content: 27.45
Gene sequence:
>510_bases ATGAAAAAAGGATATATAGCAGGTAAATTATTTAAAGAGGGGGATATACGACAAAGATTATATGAGGAAGAATCTTTAAA AAAAGAAATATCTAATGTAAAGTGGCATAATCCTATAAATGATCCTGAAGCAAATGATAAATCTAAGGTGCCAACAGCAG AGACTATATTTAATAATGACTGTAAAAAAGTATTAGAATCAAATTATATAGTAGCAGAGCTTGATGATGAAGATCCAGGA ACTATAGCAGAATTATTTATTGCATGGACAGTAAATTATTTCTATGAGTTATTTGAAGAAGGATATACTTTAGAAGAAAT AAAGGAAAAAATACCATATAAAGATATATACTGCCATTTGAGTGATATAAGGCAAGATAGCAAGGGATATGAGGGTATAA GATTACCTTGGGGAATAAATCAATTTGTAATAGGTGGATTAATAAATAATGGGAAAATAATGAGTAATTTTAAAGATATA GTAGAAGATATATCTAATAAAGAGAAATAA
Upstream 100 bases:
>100_bases TGAGTAAAAAATAATTTATTAATTTAATGATATAATAATTTCTATATGGATTAAGACTAAAAGAATAGTTAGAATATAAA TCAGGAGGAGTTGTTGAAAA
Downstream 100 bases:
>100_bases ATTTTAAATAAGAAAAACAGATTATATTTTAAAGCAGATAGTGATAGAATATATATTAAGAATTAATATAAAAAAATAAC TTAGTGAGGAGATAAATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MKKGYIAGKLFKEGDIRQRLYEEESLKKEISNVKWHNPINDPEANDKSKVPTAETIFNNDCKKVLESNYIVAELDDEDPG TIAELFIAWTVNYFYELFEEGYTLEEIKEKIPYKDIYCHLSDIRQDSKGYEGIRLPWGINQFVIGGLINNGKIMSNFKDI VEDISNKEK
Sequences:
>Translated_169_residues MKKGYIAGKLFKEGDIRQRLYEEESLKKEISNVKWHNPINDPEANDKSKVPTAETIFNNDCKKVLESNYIVAELDDEDPG TIAELFIAWTVNYFYELFEEGYTLEEIKEKIPYKDIYCHLSDIRQDSKGYEGIRLPWGINQFVIGGLINNGKIMSNFKDI VEDISNKEK >Mature_169_residues MKKGYIAGKLFKEGDIRQRLYEEESLKKEISNVKWHNPINDPEANDKSKVPTAETIFNNDCKKVLESNYIVAELDDEDPG TIAELFIAWTVNYFYELFEEGYTLEEIKEKIPYKDIYCHLSDIRQDSKGYEGIRLPWGINQFVIGGLINNGKIMSNFKDI VEDISNKEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19637; Mature: 19637
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGYIAGKLFKEGDIRQRLYEEESLKKEISNVKWHNPINDPEANDKSKVPTAETIFNND CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH CKKVLESNYIVAELDDEDPGTIAELFIAWTVNYFYELFEEGYTLEEIKEKIPYKDIYCHL HHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHH SDIRQDSKGYEGIRLPWGINQFVIGGLINNGKIMSNFKDIVEDISNKEK HHHHHHCCCCCCEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKGYIAGKLFKEGDIRQRLYEEESLKKEISNVKWHNPINDPEANDKSKVPTAETIFNND CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH CKKVLESNYIVAELDDEDPGTIAELFIAWTVNYFYELFEEGYTLEEIKEKIPYKDIYCHL HHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHH SDIRQDSKGYEGIRLPWGINQFVIGGLINNGKIMSNFKDIVEDISNKEK HHHHHHCCCCCCEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA