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The map label for this gene is ykpA [H]

Identifier: 28210316

GI number: 28210316

Start: 603668

End: 605254

Strand: Direct

Name: ykpA [H]

Synonym: CTC00580

Alternate gene names: 28210316

Gene position: 603668-605254 (Clockwise)

Preceding gene: 28210315

Following gene: 28210320

Centisome position: 21.57

GC content: 31.19

Gene sequence:

>1587_bases
ATGATAAGTACTAATAATATAAGTTTAAGATATGGAGGAAGAGTTTTATTTGAAGATGTAAATGTAAAATTTACACCAGG
AAACTGTTATGGTCTTATAGGTGCAAATGGGGCAGGAAAGTCTACATTTTTAAAAATTCTTTCAGGGGAAATTGAAGCAA
ATAAAGGGGATGTTATATTAGAGCCAGGTAAAAGAATGGCTGTACTAAAACAAGATCATTTCCAATTTGATAGTGAACCT
GTGCTAGAAACGGTAATAATGGGACATGAAAGACTTTATAATATTATGAAAGAAAAGGAAAAGATATACTCAAAAGAAGA
TTTTTCAGAAGAAGATGGAATAAAAGTTGCAGAACTAGAAGGAGAGTTTACAGAACTTAACGGTTGGGAAGCGGAATCAG
AAGCAGCAACTCTGTTAACAGGGCTTGGAATTCCTGTCGAATTACATTATAAATTAATGAAAGACTTAGATGGCGGACAA
AAGGTAAGAGTGCTTTTAGCACAGGCTTTATTTGGAAAGCCAGATATACTATTACTAGATGAGCCTACAAACCATTTGGA
TATTAAATCAATACAGTGGCTAGAAGAATTTCTTATAAACTTTGAAAATACTGTAATATTGATTTCTCATGACAGACACT
TTTTAAATAAAGTATGTACACATATAGCGGATTTAGACTTTGGAAAAATACAACTATATGTTGGAAATTATGATTTCTGG
TATGAATCAAGTCAATTAGCATTGGAAATGGCAAAAGATCAAAATAAAAAGAAAGAAGAAAAGATAAAAGATCTTGAAGA
ATTTATAGCAAGATTTAGTGCTAATGCATCTAAATCGAAACAAGCTACATCACGTAAAAAGATGCTAGATAAAATAACTT
TAGAAGATATAAAGCCGTCTTCTAGAAGATATCCTTTTGTAGGTTTTAAGCCAGATAGGGAAGCGGGAAATGATTTGCTT
GCAGTAGAGGGAATTACTAAAACTATAGATGGAGAAAAAGTTTTAAATAATGTAAGCTTTAGAGTAAATAAAGGTGATAA
AATAGCCTTTGTAGGAGAAAACAGTATAGCAAAAACAGCATTATTTCAAATACTTACGGGAGAAGATAAGGCTGATAGTG
GAGAATTTAAATGGGGAATAACCACAAGTCAATCTTATTTTCCAAATGATAATAGTAACTACTTTAATGGAGTAAATTTA
AATTTAGTGGATTGGCTTAGACAATTCTCTGAGGAAAAATCTGAAACATTTATAAGAGGATTTCTTGGAAGAATGCTTTT
CTCAGGAGAAGAAGCATTAAAAAGTGCTGAAGTATTATCTGGAGGAGAAAAGGTAAGATGTATGCTTTCAAAAATGATGC
TAAGTGGAGCAAATGTTCTTATTTTAGATGAACCAACAAACCATTTAGATCTTGAATCCATTACAGCTGTAAATAATGGA
TTGATAAATTTCCCAGGAACTATCTTATTTACTTCCCATGACCACCAATTTGTTCAAACTATAGCAAATAGGATTATTGA
AATAACTCCAGATGGAATTATAGACAGACAAATGACTTATGATGAATATTTAAATAGTAAAAAATAA

Upstream 100 bases:

>100_bases
ATACTGGATTCAGGTGTATTAATATGATATAATAGCGGATATTTGAGATTAGCGAAAATACAGAAGCTAAAATTGAAATA
GATGGAGGAACGTATTAACT

Downstream 100 bases:

>100_bases
ATAAAAATACTCTTTTCTGGCAACAACCAATATAATATAAAAGTCAGAAAAGAGTATTTTAAAATAAATTATATTTATTA
TATTACTTCTTTGTTGTAAA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 528; Mature: 528

Protein sequence:

>528_residues
MISTNNISLRYGGRVLFEDVNVKFTPGNCYGLIGANGAGKSTFLKILSGEIEANKGDVILEPGKRMAVLKQDHFQFDSEP
VLETVIMGHERLYNIMKEKEKIYSKEDFSEEDGIKVAELEGEFTELNGWEAESEAATLLTGLGIPVELHYKLMKDLDGGQ
KVRVLLAQALFGKPDILLLDEPTNHLDIKSIQWLEEFLINFENTVILISHDRHFLNKVCTHIADLDFGKIQLYVGNYDFW
YESSQLALEMAKDQNKKKEEKIKDLEEFIARFSANASKSKQATSRKKMLDKITLEDIKPSSRRYPFVGFKPDREAGNDLL
AVEGITKTIDGEKVLNNVSFRVNKGDKIAFVGENSIAKTALFQILTGEDKADSGEFKWGITTSQSYFPNDNSNYFNGVNL
NLVDWLRQFSEEKSETFIRGFLGRMLFSGEEALKSAEVLSGGEKVRCMLSKMMLSGANVLILDEPTNHLDLESITAVNNG
LINFPGTILFTSHDHQFVQTIANRIIEITPDGIIDRQMTYDEYLNSKK

Sequences:

>Translated_528_residues
MISTNNISLRYGGRVLFEDVNVKFTPGNCYGLIGANGAGKSTFLKILSGEIEANKGDVILEPGKRMAVLKQDHFQFDSEP
VLETVIMGHERLYNIMKEKEKIYSKEDFSEEDGIKVAELEGEFTELNGWEAESEAATLLTGLGIPVELHYKLMKDLDGGQ
KVRVLLAQALFGKPDILLLDEPTNHLDIKSIQWLEEFLINFENTVILISHDRHFLNKVCTHIADLDFGKIQLYVGNYDFW
YESSQLALEMAKDQNKKKEEKIKDLEEFIARFSANASKSKQATSRKKMLDKITLEDIKPSSRRYPFVGFKPDREAGNDLL
AVEGITKTIDGEKVLNNVSFRVNKGDKIAFVGENSIAKTALFQILTGEDKADSGEFKWGITTSQSYFPNDNSNYFNGVNL
NLVDWLRQFSEEKSETFIRGFLGRMLFSGEEALKSAEVLSGGEKVRCMLSKMMLSGANVLILDEPTNHLDLESITAVNNG
LINFPGTILFTSHDHQFVQTIANRIIEITPDGIIDRQMTYDEYLNSKK
>Mature_528_residues
MISTNNISLRYGGRVLFEDVNVKFTPGNCYGLIGANGAGKSTFLKILSGEIEANKGDVILEPGKRMAVLKQDHFQFDSEP
VLETVIMGHERLYNIMKEKEKIYSKEDFSEEDGIKVAELEGEFTELNGWEAESEAATLLTGLGIPVELHYKLMKDLDGGQ
KVRVLLAQALFGKPDILLLDEPTNHLDIKSIQWLEEFLINFENTVILISHDRHFLNKVCTHIADLDFGKIQLYVGNYDFW
YESSQLALEMAKDQNKKKEEKIKDLEEFIARFSANASKSKQATSRKKMLDKITLEDIKPSSRRYPFVGFKPDREAGNDLL
AVEGITKTIDGEKVLNNVSFRVNKGDKIAFVGENSIAKTALFQILTGEDKADSGEFKWGITTSQSYFPNDNSNYFNGVNL
NLVDWLRQFSEEKSETFIRGFLGRMLFSGEEALKSAEVLSGGEKVRCMLSKMMLSGANVLILDEPTNHLDLESITAVNNG
LINFPGTILFTSHDHQFVQTIANRIIEITPDGIIDRQMTYDEYLNSKK

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=529, Percent_Identity=29.4896030245747, Blast_Score=249, Evalue=3e-66,
Organism=Homo sapiens, GI10947137, Length=537, Percent_Identity=31.6573556797021, Blast_Score=229, Evalue=3e-60,
Organism=Homo sapiens, GI27881506, Length=537, Percent_Identity=31.6573556797021, Blast_Score=229, Evalue=4e-60,
Organism=Homo sapiens, GI69354671, Length=531, Percent_Identity=28.4369114877589, Blast_Score=181, Evalue=2e-45,
Organism=Homo sapiens, GI10947135, Length=531, Percent_Identity=28.4369114877589, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI21536376, Length=215, Percent_Identity=26.046511627907, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI105990541, Length=211, Percent_Identity=27.0142180094787, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI45446740, Length=242, Percent_Identity=25.6198347107438, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI47078218, Length=242, Percent_Identity=25.6198347107438, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI1787041, Length=528, Percent_Identity=48.1060606060606, Blast_Score=526, Evalue=1e-150,
Organism=Escherichia coli, GI1789751, Length=507, Percent_Identity=33.3333333333333, Blast_Score=278, Evalue=6e-76,
Organism=Escherichia coli, GI2367384, Length=523, Percent_Identity=30.5927342256214, Blast_Score=240, Evalue=2e-64,
Organism=Escherichia coli, GI1787182, Length=502, Percent_Identity=30.8764940239044, Blast_Score=229, Evalue=4e-61,
Organism=Escherichia coli, GI1789864, Length=242, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790525, Length=555, Percent_Identity=22.1621621621622, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1786398, Length=238, Percent_Identity=26.890756302521, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1786345, Length=241, Percent_Identity=26.5560165975104, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1786319, Length=232, Percent_Identity=23.2758620689655, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI145693107, Length=241, Percent_Identity=24.4813278008299, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788506, Length=230, Percent_Identity=23.0434782608696, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI87081791, Length=213, Percent_Identity=26.7605633802817, Blast_Score=66, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17553372, Length=516, Percent_Identity=30.2325581395349, Blast_Score=224, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI17555318, Length=520, Percent_Identity=28.0769230769231, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17559834, Length=511, Percent_Identity=29.7455968688845, Blast_Score=207, Evalue=9e-54,
Organism=Saccharomyces cerevisiae, GI6320874, Length=527, Percent_Identity=32.0683111954459, Blast_Score=244, Evalue=3e-65,
Organism=Saccharomyces cerevisiae, GI6321121, Length=529, Percent_Identity=28.9224952741021, Blast_Score=217, Evalue=4e-57,
Organism=Saccharomyces cerevisiae, GI6325030, Length=374, Percent_Identity=27.0053475935829, Blast_Score=114, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6324314, Length=372, Percent_Identity=26.6129032258064, Blast_Score=102, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6323278, Length=370, Percent_Identity=26.2162162162162, Blast_Score=97, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24666836, Length=513, Percent_Identity=31.3840155945419, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI24642252, Length=515, Percent_Identity=29.7087378640777, Blast_Score=227, Evalue=2e-59,
Organism=Drosophila melanogaster, GI18859989, Length=515, Percent_Identity=29.7087378640777, Blast_Score=227, Evalue=2e-59,
Organism=Drosophila melanogaster, GI24641342, Length=537, Percent_Identity=28.1191806331471, Blast_Score=195, Evalue=6e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59539; Mature: 59539

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISTNNISLRYGGRVLFEDVNVKFTPGNCYGLIGANGAGKSTFLKILSGEIEANKGDVIL
CCCCCCEEEEECCEEEEEECEEEECCCCEEEEEECCCCCHHHHHHHHCCCEECCCCCEEE
EPGKRMAVLKQDHFQFDSEPVLETVIMGHERLYNIMKEKEKIYSKEDFSEEDGIKVAELE
CCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC
GEFTELNGWEAESEAATLLTGLGIPVELHYKLMKDLDGGQKVRVLLAQALFGKPDILLLD
CCEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEE
EPTNHLDIKSIQWLEEFLINFENTVILISHDRHFLNKVCTHIADLDFGKIQLYVGNYDFW
CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCEEEE
YESSQLALEMAKDQNKKKEEKIKDLEEFIARFSANASKSKQATSRKKMLDKITLEDIKPS
ECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
SRRYPFVGFKPDREAGNDLLAVEGITKTIDGEKVLNNVSFRVNKGDKIAFVGENSIAKTA
CCCCCEECCCCCCCCCCCEEEECCCHHCCCHHHHHCCCEEEECCCCEEEEECCCCHHHHH
LFQILTGEDKADSGEFKWGITTSQSYFPNDNSNYFNGVNLNLVDWLRQFSEEKSETFIRG
HHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FLGRMLFSGEEALKSAEVLSGGEKVRCMLSKMMLSGANVLILDEPTNHLDLESITAVNNG
HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCC
LINFPGTILFTSHDHQFVQTIANRIIEITPDGIIDRQMTYDEYLNSKK
EEECCCEEEEECCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure
MISTNNISLRYGGRVLFEDVNVKFTPGNCYGLIGANGAGKSTFLKILSGEIEANKGDVIL
CCCCCCEEEEECCEEEEEECEEEECCCCEEEEEECCCCCHHHHHHHHCCCEECCCCCEEE
EPGKRMAVLKQDHFQFDSEPVLETVIMGHERLYNIMKEKEKIYSKEDFSEEDGIKVAELE
CCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC
GEFTELNGWEAESEAATLLTGLGIPVELHYKLMKDLDGGQKVRVLLAQALFGKPDILLLD
CCEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEE
EPTNHLDIKSIQWLEEFLINFENTVILISHDRHFLNKVCTHIADLDFGKIQLYVGNYDFW
CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCEEEE
YESSQLALEMAKDQNKKKEEKIKDLEEFIARFSANASKSKQATSRKKMLDKITLEDIKPS
ECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
SRRYPFVGFKPDREAGNDLLAVEGITKTIDGEKVLNNVSFRVNKGDKIAFVGENSIAKTA
CCCCCEECCCCCCCCCCCEEEECCCHHCCCHHHHHCCCEEEECCCCEEEEECCCCHHHHH
LFQILTGEDKADSGEFKWGITTSQSYFPNDNSNYFNGVNLNLVDWLRQFSEEKSETFIRG
HHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FLGRMLFSGEEALKSAEVLSGGEKVRCMLSKMMLSGANVLILDEPTNHLDLESITAVNNG
HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCC
LINFPGTILFTSHDHQFVQTIANRIIEITPDGIIDRQMTYDEYLNSKK
EEECCCEEEEECCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]