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The map label for this gene is yqfA [C]

Identifier: 28210321

GI number: 28210321

Start: 610381

End: 611016

Strand: Direct

Name: yqfA [C]

Synonym: CTC00586

Alternate gene names: 28210321

Gene position: 610381-611016 (Clockwise)

Preceding gene: 28210320

Following gene: 28210322

Centisome position: 21.81

GC content: 28.93

Gene sequence:

>636_bases
ATGGGGACAATGAATTTTTATACTAAGAAGGAGGAAATAGCAAATGCTATTACTCATGGAATAGGGGTTATATTTTCTAT
TGTGGCGTTAGTCTTATTAGTGGTTTTTGCCACGAAATATAAAGATGCTTGGTATACTGTAAGTTATAGTATCTATGGTT
CAACCTTAATAATACTATATATGTGTTCAACTCTTTATCATAGTTTTACCAATGAAAAAGTTAAAAAGATATTTAGAAAA
TTTGATCATTCATCTATATTCTTACTTATAGCAGGAACCTATACCCCTTTTACTTTAACAATACTTAGGGGAAAATTAGG
TTGGTCTATTTTAGGAATTATTTGGGTAATAACTATAGTAGGTATAGTATTAAAAATAGTTTGTTTTGAAAAAATGGAAA
AGGTATCTACATTTTTATACATAGCTATGGGATGGGTAATTGTAGTAGCATTGAAAAGTATAATTTCTTCTCTACCAGTT
AAAGGAATAGTTCTTTTAATAGCAGGTGGATTAATATATACAGTAGGATGTATATTTTATGCTAAGGATAAAATACCGTA
TAACCACGCAATATGGCATGTATTTGTGTTAGGTGGAAGTGTATGTCATTTCTTTTCCATACTTTTATACCTTTAA

Upstream 100 bases:

>100_bases
ATTTTAAATAAGAAAAACAGATTATATTTTAAAGCAGATAGTGATAGAATATATATTAAGAATTAATATAAAAAAATAAC
TTAGTGAGGAGATAAATTTT

Downstream 100 bases:

>100_bases
TTATATATATAAGTTTATAGGGGGATGTATTTTAATTATGTTAAATTTAGAATTGATATTAGCAGATATAATAAAATTTG
GAGCTAAATATGCTAAGGAT

Product: hemolysin III

Products: NA

Alternate protein names: Hemolysin III; Hly-III [H]

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MGTMNFYTKKEEIANAITHGIGVIFSIVALVLLVVFATKYKDAWYTVSYSIYGSTLIILYMCSTLYHSFTNEKVKKIFRK
FDHSSIFLLIAGTYTPFTLTILRGKLGWSILGIIWVITIVGIVLKIVCFEKMEKVSTFLYIAMGWVIVVALKSIISSLPV
KGIVLLIAGGLIYTVGCIFYAKDKIPYNHAIWHVFVLGGSVCHFFSILLYL

Sequences:

>Translated_211_residues
MGTMNFYTKKEEIANAITHGIGVIFSIVALVLLVVFATKYKDAWYTVSYSIYGSTLIILYMCSTLYHSFTNEKVKKIFRK
FDHSSIFLLIAGTYTPFTLTILRGKLGWSILGIIWVITIVGIVLKIVCFEKMEKVSTFLYIAMGWVIVVALKSIISSLPV
KGIVLLIAGGLIYTVGCIFYAKDKIPYNHAIWHVFVLGGSVCHFFSILLYL
>Mature_210_residues
GTMNFYTKKEEIANAITHGIGVIFSIVALVLLVVFATKYKDAWYTVSYSIYGSTLIILYMCSTLYHSFTNEKVKKIFRKF
DHSSIFLLIAGTYTPFTLTILRGKLGWSILGIIWVITIVGIVLKIVCFEKMEKVSTFLYIAMGWVIVVALKSIISSLPVK
GIVLLIAGGLIYTVGCIFYAKDKIPYNHAIWHVFVLGGSVCHFFSILLYL

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI154759275, Length=211, Percent_Identity=31.2796208530806, Blast_Score=97, Evalue=7e-21,
Organism=Homo sapiens, GI52630445, Length=207, Percent_Identity=30.9178743961353, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI154759277, Length=235, Percent_Identity=28.5106382978723, Blast_Score=86, Evalue=2e-17,
Organism=Escherichia coli, GI1789266, Length=206, Percent_Identity=46.1165048543689, Blast_Score=192, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI71996356, Length=213, Percent_Identity=30.0469483568075, Blast_Score=85, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24640324, Length=232, Percent_Identity=29.3103448275862, Blast_Score=90, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 23721; Mature: 23590

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTMNFYTKKEEIANAITHGIGVIFSIVALVLLVVFATKYKDAWYTVSYSIYGSTLIILY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHH
MCSTLYHSFTNEKVKKIFRKFDHSSIFLLIAGTYTPFTLTILRGKLGWSILGIIWVITIV
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GIVLKIVCFEKMEKVSTFLYIAMGWVIVVALKSIISSLPVKGIVLLIAGGLIYTVGCIFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AKDKIPYNHAIWHVFVLGGSVCHFFSILLYL
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
GTMNFYTKKEEIANAITHGIGVIFSIVALVLLVVFATKYKDAWYTVSYSIYGSTLIILY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHH
MCSTLYHSFTNEKVKKIFRKFDHSSIFLLIAGTYTPFTLTILRGKLGWSILGIIWVITIV
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GIVLKIVCFEKMEKVSTFLYIAMGWVIVVALKSIISSLPVKGIVLLIAGGLIYTVGCIFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AKDKIPYNHAIWHVFVLGGSVCHFFSILLYL
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7495855 [H]