| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is pleC [H]
Identifier: 28210209
GI number: 28210209
Start: 454492
End: 455826
Strand: Direct
Name: pleC [H]
Synonym: CTC00456
Alternate gene names: 28210209
Gene position: 454492-455826 (Clockwise)
Preceding gene: 28210208
Following gene: 28210210
Centisome position: 16.24
GC content: 27.19
Gene sequence:
>1335_bases TTGTATAGAAAAAAGAAAGTAAGCAGGGTTTTAAGTATTAAGGAGGAAAAAATGTATAAACGTATGTTGAAGGAGCTTAT TGAGATAGAGGAGATACAAAATCTTATGGAAAAGCTGTATTCTATTGTAGGAATATCTCATAGCATATTAGACTTGGATG GCAATTTAATAGTTGGCATAGGTGAAAAAGGTATTTATAAAAGCAAAAATACTAAGGAATACTTTAGTTATAATCAAAAG TATGATAAAAAAGAGGAATATTTTTTACTAACTTGTAAAGAAGGCACAAAAAAAATTGTATCACCTATAAAAGTAAAAGA AGAAAGAATAGGATATATAGTTACTGAAGATTTTTTTATAAAAGGGGAAGATAAAGAGCATTGTAAAACTTGCATAAGAG AAGACTTAGAATACATAAATTATGTAGAAAAAATACCTGTTATAAATGAAGAACAGGTTAAAAATACAATAATATATCAA AGAGATTTAATAGAGCTTATAATAAATAAGAAGATAACTGATTTATCTTATGAAGAAAATGCATATGCAAAAATGAGACA TAAATTTTTTGCCAATTTATCTCATGAATTTAGAACACCTATTACAGTAATATTAAGCTCCCTATATATGTGTGAAATTT TTTTGAAAAAAACTCAGGAAGATATATTAGATATAAAAGTTACTACATATTTAAAAAACATAAAGAAAAATGCATATAGA TTGTTAAGACTGATTAATAACTTAATAGATATGACTAAAATAAATTGTGGAGAGCTTATTTTATTTAAAGAAAACAATGA TATTGTAAATATAGTGGAGGAGACTACCTTAAGAGTAGCAAAGTATGTATATAGTAAAAATATAGATATAGTTTTTGATA CAGATGTAGAGGAAAAAATAATAGCTTGTGATAAGGAAAAAATCGAAAGAATAATATTAAATCTTCTATCAAATGCAGTA AAATTTACTCCCCGGGGAGGCCGTATATTGGTTCAAGTAGAAAATACTAATGATTTCGTAAGAATTTCTGTAGAAGATAC AGGAATAGGAATTCCAGAAGAAGAAAAGGACTTGATTTTTGAGCCCTTTACCCAAGTAGATAAGGGATTTTCAAGAATAG CAGAAGGAAGTGGCATAGGATTACCCATAATAAAATCTTTAGTGGAAATGCACAAAGGAATAATATGGGTAGAGAGTATT TGTGGAGAAGGAAGTAAATTTTTTATAGAGCTTCCCAACGTAACTTTAGAAGATTGTAATAATGCTAATGGAAAGGTTCA ATTTTCTGGTGGAGAAGAAAATACTCACATAGAATTTTCAGATATATATTTTTAG
Upstream 100 bases:
>100_bases AAAAAGCATTAATAGATTTCTGTAAAGGAATATGTCAAAAACAATTTAATGTGATAAAACTGCAATTCGTCAATCAAATA AATAATCCACCAATGATGAT
Downstream 100 bases:
>100_bases CAACTAATAATTAATGTATATATATAATTTATCTTGTATTATAATATAAATAGAATAAAACTAGGAGTGTGAGTAAAATC ATGAAAAGAATACCCTATGG
Product: sensory transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MYRKKKVSRVLSIKEEKMYKRMLKELIEIEEIQNLMEKLYSIVGISHSILDLDGNLIVGIGEKGIYKSKNTKEYFSYNQK YDKKEEYFLLTCKEGTKKIVSPIKVKEERIGYIVTEDFFIKGEDKEHCKTCIREDLEYINYVEKIPVINEEQVKNTIIYQ RDLIELIINKKITDLSYEENAYAKMRHKFFANLSHEFRTPITVILSSLYMCEIFLKKTQEDILDIKVTTYLKNIKKNAYR LLRLINNLIDMTKINCGELILFKENNDIVNIVEETTLRVAKYVYSKNIDIVFDTDVEEKIIACDKEKIERIILNLLSNAV KFTPRGGRILVQVENTNDFVRISVEDTGIGIPEEEKDLIFEPFTQVDKGFSRIAEGSGIGLPIIKSLVEMHKGIIWVESI CGEGSKFFIELPNVTLEDCNNANGKVQFSGGEENTHIEFSDIYF
Sequences:
>Translated_444_residues MYRKKKVSRVLSIKEEKMYKRMLKELIEIEEIQNLMEKLYSIVGISHSILDLDGNLIVGIGEKGIYKSKNTKEYFSYNQK YDKKEEYFLLTCKEGTKKIVSPIKVKEERIGYIVTEDFFIKGEDKEHCKTCIREDLEYINYVEKIPVINEEQVKNTIIYQ RDLIELIINKKITDLSYEENAYAKMRHKFFANLSHEFRTPITVILSSLYMCEIFLKKTQEDILDIKVTTYLKNIKKNAYR LLRLINNLIDMTKINCGELILFKENNDIVNIVEETTLRVAKYVYSKNIDIVFDTDVEEKIIACDKEKIERIILNLLSNAV KFTPRGGRILVQVENTNDFVRISVEDTGIGIPEEEKDLIFEPFTQVDKGFSRIAEGSGIGLPIIKSLVEMHKGIIWVESI CGEGSKFFIELPNVTLEDCNNANGKVQFSGGEENTHIEFSDIYF >Mature_444_residues MYRKKKVSRVLSIKEEKMYKRMLKELIEIEEIQNLMEKLYSIVGISHSILDLDGNLIVGIGEKGIYKSKNTKEYFSYNQK YDKKEEYFLLTCKEGTKKIVSPIKVKEERIGYIVTEDFFIKGEDKEHCKTCIREDLEYINYVEKIPVINEEQVKNTIIYQ RDLIELIINKKITDLSYEENAYAKMRHKFFANLSHEFRTPITVILSSLYMCEIFLKKTQEDILDIKVTTYLKNIKKNAYR LLRLINNLIDMTKINCGELILFKENNDIVNIVEETTLRVAKYVYSKNIDIVFDTDVEEKIIACDKEKIERIILNLLSNAV KFTPRGGRILVQVENTNDFVRISVEDTGIGIPEEEKDLIFEPFTQVDKGFSRIAEGSGIGLPIIKSLVEMHKGIIWVESI CGEGSKFFIELPNVTLEDCNNANGKVQFSGGEENTHIEFSDIYF
Specific function: Member of the two-component regulatory system involved in the regulation of polar organelle development. PleC functions as a membrane-associated protein kinase that transfers phosphate to the response regulator pleD, leading to its activation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=247, Percent_Identity=32.7935222672065, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1786600, Length=251, Percent_Identity=31.4741035856574, Blast_Score=112, Evalue=4e-26, Organism=Escherichia coli, GI145693157, Length=247, Percent_Identity=29.5546558704453, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1786783, Length=226, Percent_Identity=30.0884955752212, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1788713, Length=234, Percent_Identity=29.4871794871795, Blast_Score=99, Evalue=6e-22, Organism=Escherichia coli, GI48994928, Length=240, Percent_Identity=32.0833333333333, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1790436, Length=232, Percent_Identity=28.0172413793103, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1786912, Length=239, Percent_Identity=27.1966527196653, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1788393, Length=231, Percent_Identity=25.5411255411255, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1788549, Length=226, Percent_Identity=28.3185840707965, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI87082128, Length=250, Percent_Identity=28.4, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI87081816, Length=258, Percent_Identity=28.2945736434109, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790300, Length=263, Percent_Identity=25.8555133079848, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1790346, Length=239, Percent_Identity=24.2677824267782, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788279, Length=227, Percent_Identity=28.6343612334802, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1790861, Length=205, Percent_Identity=26.3414634146341, Blast_Score=62, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=88, Percent_Identity=42.0454545454545, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 51621; Mature: 51621
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRKKKVSRVLSIKEEKMYKRMLKELIEIEEIQNLMEKLYSIVGISHSILDLDGNLIVGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCEEEEE GEKGIYKSKNTKEYFSYNQKYDKKEEYFLLTCKEGTKKIVSPIKVKEERIGYIVTEDFFI CCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEECCCCHHHHCCHHCCHHHCCEEEEECEEE KGEDKEHCKTCIREDLEYINYVEKIPVINEEQVKNTIIYQRDLIELIINKKITDLSYEEN ECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH AYAKMRHKFFANLSHEFRTPITVILSSLYMCEIFLKKTQEDILDIKVTTYLKNIKKNAYR HHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRLINNLIDMTKINCGELILFKENNDIVNIVEETTLRVAKYVYSKNIDIVFDTDVEEKI HHHHHHHHHHHCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHCCCCEEECCCCHHHH IACDKEKIERIILNLLSNAVKFTPRGGRILVQVENTNDFVRISVEDTGIGIPEEEKDLIF HHCCHHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCHHH EPFTQVDKGFSRIAEGSGIGLPIIKSLVEMHKGIIWVESICGEGSKFFIELPNVTLEDCN CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEEEHHHCCCCEEEEECCCCCCCCCC NANGKVQFSGGEENTHIEFSDIYF CCCCEEEECCCCCCCEEEEEECCC >Mature Secondary Structure MYRKKKVSRVLSIKEEKMYKRMLKELIEIEEIQNLMEKLYSIVGISHSILDLDGNLIVGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCEEEEE GEKGIYKSKNTKEYFSYNQKYDKKEEYFLLTCKEGTKKIVSPIKVKEERIGYIVTEDFFI CCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEECCCCHHHHCCHHCCHHHCCEEEEECEEE KGEDKEHCKTCIREDLEYINYVEKIPVINEEQVKNTIIYQRDLIELIINKKITDLSYEEN ECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH AYAKMRHKFFANLSHEFRTPITVILSSLYMCEIFLKKTQEDILDIKVTTYLKNIKKNAYR HHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRLINNLIDMTKINCGELILFKENNDIVNIVEETTLRVAKYVYSKNIDIVFDTDVEEKI HHHHHHHHHHHCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHCCCCEEECCCCHHHH IACDKEKIERIILNLLSNAVKFTPRGGRILVQVENTNDFVRISVEDTGIGIPEEEKDLIF HHCCHHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCHHH EPFTQVDKGFSRIAEGSGIGLPIIKSLVEMHKGIIWVESICGEGSKFFIELPNVTLEDCN CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEEEHHHCCCCEEEEECCCCCCCCCC NANGKVQFSGGEENTHIEFSDIYF CCCCEEEECCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8421698; 11259647 [H]