| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210210
Identifier: 28210210
GI number: 28210210
Start: 455895
End: 457601
Strand: Direct
Name: 28210210
Synonym: CTC00457
Alternate gene names: NA
Gene position: 455895-457601 (Clockwise)
Preceding gene: 28210209
Following gene: 28210212
Centisome position: 16.29
GC content: 26.89
Gene sequence:
>1707_bases GTGAGTAAAATCATGAAAAGAATACCCTATGGCATTTCTAATTTTGAAGTTTTAAGGGAAGAAAATTATCTTTATGTAGA CAAAACATCTTACATAGAATTATTAGATAAATATGCTCCTTATCAGTTTTTCATAAGACCCCGAAGATTTGGAAAAAGTC TTTTTATATCCACATTAGAAAATTACTATGACATAAATAAGAAAGATAAATTTGAAGAATTATTTGGTGATTTATATATA GGAAAAAATCCTACAAAAAATAAAAATAAGTTTCTAATTTGGAAAATAAGTTTTGCAGGTATAGATGCAGGACACGGAGA AGAAGAACTTAGAAAGAGTTTTAATTCAAAAGTTATTTTATCTGCAAGAAAGTTTCTAAATCAATACTCAAATTTATTAC AAGAAAATACTATTCTAGACGAAGTAGATAGTGCTGAAATTGTAGTGCAATATATATCACTTTTAGCCAGTAAAATAAAA ATACCTATATTTGTTTTAATAGATGAATATGATAATTTTGCTAATGAACTAATTACAGGAGGAAAACAAAGTACCTATGA AAGTATTCTCCATGGTGAAGGCTTTGTTAAAGTGTTTTATAAGGCATTAAAAGATGCAACCATGGATAATTTTAATAGAA TATTTATGACTGGAGTAAGTCCTATAATGTTAGACGATTTAACCAGTGGATTTAACATAACTAGAAACTATACTTTAGAT GAAAACCTTAATGCAATGATGGGCTTTACAAGAGAAGAACTTTCCAATATTATGAATGAAGTAAATATAAAGGATACAGA ACTTAGAGTGAAAATATGTACTGATATGACTACTTATTATAATGGATATAAGTTTAATAAAAAAGCTGATAGTGTATTCA ATCCAGATATGTCTATGTATTTTTTAGATAATTATCTAGCATATAATGAATATCCAGAGGAAATGATAGATAATAATGTA AAAACTGACTATGGAAAAGTTAATCAATTAGCTTATAATTTCAATGATATAGAGGCTTTAGAGGAGATAATGACTAAGGG AGAAACCTCTACTATGCTTGTGGATAGATTTAATATTCATACTATGTACAGTGTAAAGGAAAATTTTAAATCCCTATTAT TTTATCTTGGAATGCTTACAATAAAGGGTCAAGGACCACTTGGTACTGTACTTAGGGTACCTAACTATGTGATAAAAACA ATTTATTGGGAACAATACTTTCAAAGAATGAATTTAGAATATAATATTCAGCCTAAAGATGTAAGAATAGCAGTTAATGA AATGAGATCATATGGAAACATTGAGCCTTTAGCTGAGATTATAGGTGAAATATTAGAAGATTTATCTAATAGAGATTTAA TGCAAATGGACGAAAAGCACATTAAAATGATGTTTTTAACTCTTTTTGGGATAGATGGTACTTATTTTATACAAAGTGAA GCTGAAAATAACAAAGGTTATGTGGATATAATGCTTAAAAGAAAAATTCAATATAAAGACATAACCAAATTTCAGTGGAT TATAGAATTAAAATATATAAAGGAAAGTGAAAGAAATACCTTAGAGAAAGTTAAAGAAGAAGGATTAAATCAACTTAAAG GTTATGCAGAAAGTAAAGTAGTTAAAGAACAACTAGGAGATGAAGGATTAAAAAAAGCTCTAATTATTGTAGTAGGTAAA AAAGATATTTATATTGTAGAACTATAA
Upstream 100 bases:
>100_bases CTCACATAGAATTTTCAGATATATATTTTTAGCAACTAATAATTAATGTATATATATAATTTATCTTGTATTATAATATA AATAGAATAAAACTAGGAGT
Downstream 100 bases:
>100_bases TAGTGAATTGTCACTCCCACTTTAAAGAAGATGGTGGGATTATATTTGGTAGTCATTGAATAAAAAGCTTTAATTAAAAA AATGAGTTGTATTAAAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 568; Mature: 567
Protein sequence:
>568_residues MSKIMKRIPYGISNFEVLREENYLYVDKTSYIELLDKYAPYQFFIRPRRFGKSLFISTLENYYDINKKDKFEELFGDLYI GKNPTKNKNKFLIWKISFAGIDAGHGEEELRKSFNSKVILSARKFLNQYSNLLQENTILDEVDSAEIVVQYISLLASKIK IPIFVLIDEYDNFANELITGGKQSTYESILHGEGFVKVFYKALKDATMDNFNRIFMTGVSPIMLDDLTSGFNITRNYTLD ENLNAMMGFTREELSNIMNEVNIKDTELRVKICTDMTTYYNGYKFNKKADSVFNPDMSMYFLDNYLAYNEYPEEMIDNNV KTDYGKVNQLAYNFNDIEALEEIMTKGETSTMLVDRFNIHTMYSVKENFKSLLFYLGMLTIKGQGPLGTVLRVPNYVIKT IYWEQYFQRMNLEYNIQPKDVRIAVNEMRSYGNIEPLAEIIGEILEDLSNRDLMQMDEKHIKMMFLTLFGIDGTYFIQSE AENNKGYVDIMLKRKIQYKDITKFQWIIELKYIKESERNTLEKVKEEGLNQLKGYAESKVVKEQLGDEGLKKALIIVVGK KDIYIVEL
Sequences:
>Translated_568_residues MSKIMKRIPYGISNFEVLREENYLYVDKTSYIELLDKYAPYQFFIRPRRFGKSLFISTLENYYDINKKDKFEELFGDLYI GKNPTKNKNKFLIWKISFAGIDAGHGEEELRKSFNSKVILSARKFLNQYSNLLQENTILDEVDSAEIVVQYISLLASKIK IPIFVLIDEYDNFANELITGGKQSTYESILHGEGFVKVFYKALKDATMDNFNRIFMTGVSPIMLDDLTSGFNITRNYTLD ENLNAMMGFTREELSNIMNEVNIKDTELRVKICTDMTTYYNGYKFNKKADSVFNPDMSMYFLDNYLAYNEYPEEMIDNNV KTDYGKVNQLAYNFNDIEALEEIMTKGETSTMLVDRFNIHTMYSVKENFKSLLFYLGMLTIKGQGPLGTVLRVPNYVIKT IYWEQYFQRMNLEYNIQPKDVRIAVNEMRSYGNIEPLAEIIGEILEDLSNRDLMQMDEKHIKMMFLTLFGIDGTYFIQSE AENNKGYVDIMLKRKIQYKDITKFQWIIELKYIKESERNTLEKVKEEGLNQLKGYAESKVVKEQLGDEGLKKALIIVVGK KDIYIVEL >Mature_567_residues SKIMKRIPYGISNFEVLREENYLYVDKTSYIELLDKYAPYQFFIRPRRFGKSLFISTLENYYDINKKDKFEELFGDLYIG KNPTKNKNKFLIWKISFAGIDAGHGEEELRKSFNSKVILSARKFLNQYSNLLQENTILDEVDSAEIVVQYISLLASKIKI PIFVLIDEYDNFANELITGGKQSTYESILHGEGFVKVFYKALKDATMDNFNRIFMTGVSPIMLDDLTSGFNITRNYTLDE NLNAMMGFTREELSNIMNEVNIKDTELRVKICTDMTTYYNGYKFNKKADSVFNPDMSMYFLDNYLAYNEYPEEMIDNNVK TDYGKVNQLAYNFNDIEALEEIMTKGETSTMLVDRFNIHTMYSVKENFKSLLFYLGMLTIKGQGPLGTVLRVPNYVIKTI YWEQYFQRMNLEYNIQPKDVRIAVNEMRSYGNIEPLAEIIGEILEDLSNRDLMQMDEKHIKMMFLTLFGIDGTYFIQSEA ENNKGYVDIMLKRKIQYKDITKFQWIIELKYIKESERNTLEKVKEEGLNQLKGYAESKVVKEQLGDEGLKKALIIVVGKK DIYIVEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018631 - InterPro: IPR012547 [H]
Pfam domain/function: PF09820 AAA-ATPase_like; PF08011 DUF1703 [H]
EC number: NA
Molecular weight: Translated: 66468; Mature: 66337
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIMKRIPYGISNFEVLREENYLYVDKTSYIELLDKYAPYQFFIRPRRFGKSLFISTLE CCHHHHHCCCCCCCHHHEECCCEEEEECHHHHHHHHHHCCEEEEEEHHHHCHHHHHHHHH NYYDINKKDKFEELFGDLYIGKNPTKNKNKFLIWKISFAGIDAGHGEEELRKSFNSKVIL HHHCCCCCHHHHHHHHCEEECCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHCCCEEEH SARKFLNQYSNLLQENTILDEVDSAEIVVQYISLLASKIKIPIFVLIDEYDNFANELITG HHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHCC GKQSTYESILHGEGFVKVFYKALKDATMDNFNRIFMTGVSPIMLDDLTSGFNITRNYTLD CCHHHHHHHHCCCHHHHHHHHHHHHCHHHCCCEEEECCCCHHHHHHCCCCCCEEEECEEC ENLNAMMGFTREELSNIMNEVNIKDTELRVKICTDMTTYYNGYKFNKKADSVFNPDMSMY CCCHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHCCEEECCCCCCCCCCCCHHH FLDNYLAYNEYPEEMIDNNVKTDYGKVNQLAYNFNDIEALEEIMTKGETSTMLVDRFNIH HHHHHHHHCCCCHHHHCCCCCCCCCCHHHHEECCHHHHHHHHHHHCCCCCEEEEEECCCE TMYSVKENFKSLLFYLGMLTIKGQGPLGTVLRVPNYVIKTIYWEQYFQRMNLEYNIQPKD EEHHHHHHHHHHHHHHHHHEEECCCCCHHHHHCCHHHHHHHHHHHHHHHCCCEEECCCCH VRIAVNEMRSYGNIEPLAEIIGEILEDLSNRDLMQMDEKHIKMMFLTLFGIDGTYFIQSE HEEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEC AENNKGYVDIMLKRKIQYKDITKFQWIIELKYIKESERNTLEKVKEEGLNQLKGYAESKV CCCCCCEEEEEEECCCCCCCCCHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKEQLGDEGLKKALIIVVGKKDIYIVEL HHHHHCCHHCCEEEEEEECCCCEEEEEC >Mature Secondary Structure SKIMKRIPYGISNFEVLREENYLYVDKTSYIELLDKYAPYQFFIRPRRFGKSLFISTLE CHHHHHCCCCCCCHHHEECCCEEEEECHHHHHHHHHHCCEEEEEEHHHHCHHHHHHHHH NYYDINKKDKFEELFGDLYIGKNPTKNKNKFLIWKISFAGIDAGHGEEELRKSFNSKVIL HHHCCCCCHHHHHHHHCEEECCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHCCCEEEH SARKFLNQYSNLLQENTILDEVDSAEIVVQYISLLASKIKIPIFVLIDEYDNFANELITG HHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHCC GKQSTYESILHGEGFVKVFYKALKDATMDNFNRIFMTGVSPIMLDDLTSGFNITRNYTLD CCHHHHHHHHCCCHHHHHHHHHHHHCHHHCCCEEEECCCCHHHHHHCCCCCCEEEECEEC ENLNAMMGFTREELSNIMNEVNIKDTELRVKICTDMTTYYNGYKFNKKADSVFNPDMSMY CCCHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHCCEEECCCCCCCCCCCCHHH FLDNYLAYNEYPEEMIDNNVKTDYGKVNQLAYNFNDIEALEEIMTKGETSTMLVDRFNIH HHHHHHHHCCCCHHHHCCCCCCCCCCHHHHEECCHHHHHHHHHHHCCCCCEEEEEECCCE TMYSVKENFKSLLFYLGMLTIKGQGPLGTVLRVPNYVIKTIYWEQYFQRMNLEYNIQPKD EEHHHHHHHHHHHHHHHHHEEECCCCCHHHHHCCHHHHHHHHHHHHHHHCCCEEECCCCH VRIAVNEMRSYGNIEPLAEIIGEILEDLSNRDLMQMDEKHIKMMFLTLFGIDGTYFIQSE HEEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEC AENNKGYVDIMLKRKIQYKDITKFQWIIELKYIKESERNTLEKVKEEGLNQLKGYAESKV CCCCCCEEEEEEECCCCCCCCCHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKEQLGDEGLKKALIIVVGKKDIYIVEL HHHHHCCHHCCEEEEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2388847 [H]