Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210146

Identifier: 28210146

GI number: 28210146

Start: 385442

End: 385852

Strand: Direct

Name: 28210146

Synonym: CTC00391

Alternate gene names: NA

Gene position: 385442-385852 (Clockwise)

Preceding gene: 28210145

Following gene: 28210147

Centisome position: 13.77

GC content: 28.95

Gene sequence:

>411_bases
ATGAAGATGTCTAAAATCATGGAAATTACCATATATGAATCTTTAAAAGACATTGAAAAACGACTAAAATCCAATTTAAA
AGGTCTTCGTTGGGAGATTGAGCATACAGAAGATTTAAGAACTATAGAAGGACATAGAGTTAAAATTTACTTTGGTGTTA
CTTCATCTTTTGGAGGAGTAAATGTAGTGTCATTTATAAATCATGGTGGAGGATATGTTCCATATTATATTAAATTAACA
GAAATTGGTGAGTATGAAACGAAGATAATGGTGGCAATAACAGGTGCAGAAGATGTGATTACTGATTATGGTAATCGAAA
TGAAAATATTGCAAAGCAATTGTTAGAAATGTGTCAAAAAGATTGTACGAATAAAACCTTTAAAGAAAAAGCAAGAAAAT
TTTTTAAGTAA

Upstream 100 bases:

>100_bases
ATAGATTAAATAAAAAATTAAAAATATGAATTTAATGAACAATTAGTATAATTGTGTTAAAATGTAGCCAAGATAAAAAT
TTCAAGAGTGGTGAATATAA

Downstream 100 bases:

>100_bases
AAATTATACCTGCCATAGATTTTTGGTGGGTTTTATTTATTTTGTATCTATAATATATTGTAATAAATATTAAGTATTGT
AAAATTAATATATAAATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKMSKIMEITIYESLKDIEKRLKSNLKGLRWEIEHTEDLRTIEGHRVKIYFGVTSSFGGVNVVSFINHGGGYVPYYIKLT
EIGEYETKIMVAITGAEDVITDYGNRNENIAKQLLEMCQKDCTNKTFKEKARKFFK

Sequences:

>Translated_136_residues
MKMSKIMEITIYESLKDIEKRLKSNLKGLRWEIEHTEDLRTIEGHRVKIYFGVTSSFGGVNVVSFINHGGGYVPYYIKLT
EIGEYETKIMVAITGAEDVITDYGNRNENIAKQLLEMCQKDCTNKTFKEKARKFFK
>Mature_136_residues
MKMSKIMEITIYESLKDIEKRLKSNLKGLRWEIEHTEDLRTIEGHRVKIYFGVTSSFGGVNVVSFINHGGGYVPYYIKLT
EIGEYETKIMVAITGAEDVITDYGNRNENIAKQLLEMCQKDCTNKTFKEKARKFFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15754; Mature: 15754

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMSKIMEITIYESLKDIEKRLKSNLKGLRWEIEHTEDLRTIEGHRVKIYFGVTSSFGGV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCCEEEEEEEECCCCCCH
NVVSFINHGGGYVPYYIKLTEIGEYETKIMVAITGAEDVITDYGNRNENIAKQLLEMCQK
HHHHHHHCCCCEEEEEEEEEECCCCCEEEEEEEECCHHHHHCCCCCCHHHHHHHHHHHHH
DCTNKTFKEKARKFFK
HCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKMSKIMEITIYESLKDIEKRLKSNLKGLRWEIEHTEDLRTIEGHRVKIYFGVTSSFGGV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCCEEEEEEEECCCCCCH
NVVSFINHGGGYVPYYIKLTEIGEYETKIMVAITGAEDVITDYGNRNENIAKQLLEMCQK
HHHHHHHCCCCEEEEEEEEEECCCCCEEEEEEEECCHHHHHCCCCCCHHHHHHHHHHHHH
DCTNKTFKEKARKFFK
HCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA