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The map label for this gene is yvcP [H]

Identifier: 28210147

GI number: 28210147

Start: 385961

End: 386656

Strand: Direct

Name: yvcP [H]

Synonym: CTC00392

Alternate gene names: 28210147

Gene position: 385961-386656 (Clockwise)

Preceding gene: 28210146

Following gene: 28210148

Centisome position: 13.79

GC content: 26.87

Gene sequence:

>696_bases
GTGATAAATTTGTATAGTATTATGATTATAGAAGATGACAAGAAAATGGCTAAACTTATAAAAAATCACTTAGAACGATA
TGGATATAAAACATTTTTAATTAAAGACTTTTCAAATATAAAAGATGAATTTTTAGAACATAAGCCAGACCTTGTTTTAA
TGGATATAAATCTTCCTTTCTTTGATGGATTTTATTGGTGTAGCCATATAAGAAGTCATTCTAAAGTACCCATAATATTT
ATATCATCTAGAGATTCAGATATGGACCAAGTTATGGCAATAGATAATGGAGGAGATGACTTTATAACAAAGCCATTTTC
TTATGATGTGCTATTGGCAAAGATCAAAGGTGTATTAAGAAGAGTATATGGTAGCTATGCTAAAGGTGATACAGATTTTT
TAAAAATTGATGATTTGATATTATATACAAATAAGAATGTATTGGAGTATAAAGGTAAAAAAACTGAACTTAGTAAAAAT
GAATTTTCCCTTTTATTGCATCTTTTAAAAAACATAAATAAAATTGTTTCAAGGGATACTTTGCTTGGAATTCTTTGGAG
TGATATTGATTTTATTGATGATAATACTCTTTCTGTTAATGTTACAAGACTTAGAAAGAGGCTAGAAGAAATAGGTATTA
CTAATGCTATAGAGACAAAACGTGGTCAAGGATATATACTTATTAATAATTGGTAG

Upstream 100 bases:

>100_bases
CCTGCCATAGATTTTTGGTGGGTTTTATTTATTTTGTATCTATAATATATTGTAATAAATATTAAGTATTGTAAAATTAA
TATATAAATATTTAAAGGTA

Downstream 100 bases:

>100_bases
ATCAAAGAGTGGGTGAATAAAGTGAATTTTATAGACTTTTTAAAAGATAGAATAGCTTATATAATAGTTTATCTAATAAG
TATATCTTTCGTTATATTAA

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MINLYSIMIIEDDKKMAKLIKNHLERYGYKTFLIKDFSNIKDEFLEHKPDLVLMDINLPFFDGFYWCSHIRSHSKVPIIF
ISSRDSDMDQVMAIDNGGDDFITKPFSYDVLLAKIKGVLRRVYGSYAKGDTDFLKIDDLILYTNKNVLEYKGKKTELSKN
EFSLLLHLLKNINKIVSRDTLLGILWSDIDFIDDNTLSVNVTRLRKRLEEIGITNAIETKRGQGYILINNW

Sequences:

>Translated_231_residues
MINLYSIMIIEDDKKMAKLIKNHLERYGYKTFLIKDFSNIKDEFLEHKPDLVLMDINLPFFDGFYWCSHIRSHSKVPIIF
ISSRDSDMDQVMAIDNGGDDFITKPFSYDVLLAKIKGVLRRVYGSYAKGDTDFLKIDDLILYTNKNVLEYKGKKTELSKN
EFSLLLHLLKNINKIVSRDTLLGILWSDIDFIDDNTLSVNVTRLRKRLEEIGITNAIETKRGQGYILINNW
>Mature_231_residues
MINLYSIMIIEDDKKMAKLIKNHLERYGYKTFLIKDFSNIKDEFLEHKPDLVLMDINLPFFDGFYWCSHIRSHSKVPIIF
ISSRDSDMDQVMAIDNGGDDFITKPFSYDVLLAKIKGVLRRVYGSYAKGDTDFLKIDDLILYTNKNVLEYKGKKTELSKN
EFSLLLHLLKNINKIVSRDTLLGILWSDIDFIDDNTLSVNVTRLRKRLEEIGITNAIETKRGQGYILINNW

Specific function: Member of the two-component regulatory system yvcQ/yvcP [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=222, Percent_Identity=29.2792792792793, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1788394, Length=224, Percent_Identity=29.9107142857143, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1786911, Length=207, Percent_Identity=28.5024154589372, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1790860, Length=224, Percent_Identity=26.3392857142857, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=26.2443438914027, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1790863, Length=225, Percent_Identity=29.7777777777778, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI87082012, Length=226, Percent_Identity=29.2035398230088, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1787229, Length=227, Percent_Identity=26.431718061674, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=27.1929824561404, Blast_Score=97, Evalue=6e-22,
Organism=Escherichia coli, GI1789809, Length=232, Percent_Identity=25, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI1786784, Length=223, Percent_Identity=28.2511210762332, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1790552, Length=229, Percent_Identity=27.5109170305677, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1789402, Length=222, Percent_Identity=26.1261261261261, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI145693140, Length=239, Percent_Identity=28.4518828451883, Blast_Score=85, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26928; Mature: 26928

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLYSIMIIEDDKKMAKLIKNHLERYGYKTFLIKDFSNIKDEFLEHKPDLVLMDINLPF
CEEEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCEEEEECCCCH
FDGFYWCSHIRSHSKVPIIFISSRDSDMDQVMAIDNGGDDFITKPFSYDVLLAKIKGVLR
HHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEECCCCCCCEECCCCHHHHHHHHHHHHH
RVYGSYAKGDTDFLKIDDLILYTNKNVLEYKGKKTELSKNEFSLLLHLLKNINKIVSRDT
HHHCCCCCCCCCEEEECEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LLGILWSDIDFIDDNTLSVNVTRLRKRLEEIGITNAIETKRGQGYILINNW
HHHHHHCCCEECCCCEEEEEHHHHHHHHHHCCCCCCHHCCCCCEEEEEECC
>Mature Secondary Structure
MINLYSIMIIEDDKKMAKLIKNHLERYGYKTFLIKDFSNIKDEFLEHKPDLVLMDINLPF
CEEEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCEEEEECCCCH
FDGFYWCSHIRSHSKVPIIFISSRDSDMDQVMAIDNGGDDFITKPFSYDVLLAKIKGVLR
HHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEECCCCCCCEECCCCHHHHHHHHHHHHH
RVYGSYAKGDTDFLKIDDLILYTNKNVLEYKGKKTELSKNEFSLLLHLLKNINKIVSRDT
HHHCCCCCCCCCEEEECEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LLGILWSDIDFIDDNTLSVNVTRLRKRLEEIGITNAIETKRGQGYILINNW
HHHHHHCCCEECCCCEEEEEHHHHHHHHHHCCCCCCHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]