Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210145

Identifier: 28210145

GI number: 28210145

Start: 384103

End: 385182

Strand: Direct

Name: 28210145

Synonym: CTC00390

Alternate gene names: NA

Gene position: 384103-385182 (Clockwise)

Preceding gene: 28210143

Following gene: 28210146

Centisome position: 13.72

GC content: 27.22

Gene sequence:

>1080_bases
ATGAAGATATCAGATTTTATATTCAAATTTTCAACTAGCACAGTTTCAAACCGTGATGGTTTATGTCGGATAAGAATTTT
TGTAGGGGACAATAAAATAATCACATTAATAACTGATATAGGTAACTTAAATCCATCTGAGTCAGTAACAAATTCAATAG
AAAAGATAAGGTTATTATTGATACAAAAAGGACTAGTTAATGAAAAATCAATTTTTATAGAACATTATGAGAAAGAAAAG
TTTAGTAATGCAAGTTTTGATATTGTAGAATTTCATGACAATGGGAGTCCTAGCTGGTATCCTATAACAAAAGAAAAATT
AAAAGAATTATTAGATTGTGATGATAAGGAGTTATCTGATTTAACTAAAAAGAATAAAAGGTTACTTTCAGAAATTGGCA
GAATTATATATGCTGTTAATCCGAGAAATGATTTTTGTTGTCAGGAAAGTCCAGATATTATTAAAAGAAAACTTGAAATT
GAAGAAAATAAAATAAGTAAAAGCGAACTTATCAAGATTATTGAAAGTGGAGCTAAAGAGCAAACTATTTCACAGCTACT
TAAGTCAGATCTATCTATTTTTGCTGAAATATATGCTTGTCCTAAAGATGAGTATATTTGTTTTTCTGAGTTTCCTATAG
ATGATGGGTATGTAGATTATCTGGTTCTAACGGGAAGATCAAGAATGGATGTATATCTTATTGAAATTAAAGGAGCAGAT
TTTGATTTAGTTAACAAGAATAAAGAAAAATTCAATGAAAAAGTTAGTGAAGCTGATCATCAAATCAAAACTAGATTAGG
GTTTATATATAGAAATTATGAGTTTTTTAGGAAAAATATACATGATGTAAGAAGAAAAGCAGAGAATGGAGAAATAGTGT
TTAACTCTTTTAGAGGTGCAATAAATAATTTATATGTTGATCCTGATAAAGATATAAATATATATTCAGTTATAATAGGT
GGAAGAACAGGTGACGATTATGAAGAAAGCAAACTTAGACATAATTATGAAATAGATAGTAAGTTTAAAACAAAATTAGA
AACATGGGATACTTTCATAAGAAAACTGGTAAGAAGCTAA

Upstream 100 bases:

>100_bases
GGATAATTGTTTTTAGTCAAACTTATTGTATTTCCTTATGGGAAGAAGAGCAATGTTCATATTAACTTAATAGAACGGAC
TTTAATATTGGGGGAAATAT

Downstream 100 bases:

>100_bases
AAATATAAATCAGTAGTTAAGTATTGCGTAACTAGAGATATTTTTAAATATAAGTAAATTCAAACAAAAAATTTGTGGGT
TTTACCTATTTTACGTCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MKISDFIFKFSTSTVSNRDGLCRIRIFVGDNKIITLITDIGNLNPSESVTNSIEKIRLLLIQKGLVNEKSIFIEHYEKEK
FSNASFDIVEFHDNGSPSWYPITKEKLKELLDCDDKELSDLTKKNKRLLSEIGRIIYAVNPRNDFCCQESPDIIKRKLEI
EENKISKSELIKIIESGAKEQTISQLLKSDLSIFAEIYACPKDEYICFSEFPIDDGYVDYLVLTGRSRMDVYLIEIKGAD
FDLVNKNKEKFNEKVSEADHQIKTRLGFIYRNYEFFRKNIHDVRRKAENGEIVFNSFRGAINNLYVDPDKDINIYSVIIG
GRTGDDYEESKLRHNYEIDSKFKTKLETWDTFIRKLVRS

Sequences:

>Translated_359_residues
MKISDFIFKFSTSTVSNRDGLCRIRIFVGDNKIITLITDIGNLNPSESVTNSIEKIRLLLIQKGLVNEKSIFIEHYEKEK
FSNASFDIVEFHDNGSPSWYPITKEKLKELLDCDDKELSDLTKKNKRLLSEIGRIIYAVNPRNDFCCQESPDIIKRKLEI
EENKISKSELIKIIESGAKEQTISQLLKSDLSIFAEIYACPKDEYICFSEFPIDDGYVDYLVLTGRSRMDVYLIEIKGAD
FDLVNKNKEKFNEKVSEADHQIKTRLGFIYRNYEFFRKNIHDVRRKAENGEIVFNSFRGAINNLYVDPDKDINIYSVIIG
GRTGDDYEESKLRHNYEIDSKFKTKLETWDTFIRKLVRS
>Mature_359_residues
MKISDFIFKFSTSTVSNRDGLCRIRIFVGDNKIITLITDIGNLNPSESVTNSIEKIRLLLIQKGLVNEKSIFIEHYEKEK
FSNASFDIVEFHDNGSPSWYPITKEKLKELLDCDDKELSDLTKKNKRLLSEIGRIIYAVNPRNDFCCQESPDIIKRKLEI
EENKISKSELIKIIESGAKEQTISQLLKSDLSIFAEIYACPKDEYICFSEFPIDDGYVDYLVLTGRSRMDVYLIEIKGAD
FDLVNKNKEKFNEKVSEADHQIKTRLGFIYRNYEFFRKNIHDVRRKAENGEIVFNSFRGAINNLYVDPDKDINIYSVIIG
GRTGDDYEESKLRHNYEIDSKFKTKLETWDTFIRKLVRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41824; Mature: 41824

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISDFIFKFSTSTVSNRDGLCRIRIFVGDNKIITLITDIGNLNPSESVTNSIEKIRLLL
CCCHHHHEEEECCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHH
IQKGLVNEKSIFIEHYEKEKFSNASFDIVEFHDNGSPSWYPITKEKLKELLDCDDKELSD
HHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEECCCHHHHHHHHCCCCHHHHH
LTKKNKRLLSEIGRIIYAVNPRNDFCCQESPDIIKRKLEIEENKISKSELIKIIESGAKE
HHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHH
QTISQLLKSDLSIFAEIYACPKDEYICFSEFPIDDGYVDYLVLTGRSRMDVYLIEIKGAD
HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEECCC
FDLVNKNKEKFNEKVSEADHQIKTRLGFIYRNYEFFRKNIHDVRRKAENGEIVFNSFRGA
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHH
INNLYVDPDKDINIYSVIIGGRTGDDYEESKLRHNYEIDSKFKTKLETWDTFIRKLVRS
HHCEEECCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKISDFIFKFSTSTVSNRDGLCRIRIFVGDNKIITLITDIGNLNPSESVTNSIEKIRLLL
CCCHHHHEEEECCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHH
IQKGLVNEKSIFIEHYEKEKFSNASFDIVEFHDNGSPSWYPITKEKLKELLDCDDKELSD
HHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEECCCHHHHHHHHCCCCHHHHH
LTKKNKRLLSEIGRIIYAVNPRNDFCCQESPDIIKRKLEIEENKISKSELIKIIESGAKE
HHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHH
QTISQLLKSDLSIFAEIYACPKDEYICFSEFPIDDGYVDYLVLTGRSRMDVYLIEIKGAD
HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEECCC
FDLVNKNKEKFNEKVSEADHQIKTRLGFIYRNYEFFRKNIHDVRRKAENGEIVFNSFRGA
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHH
INNLYVDPDKDINIYSVIIGGRTGDDYEESKLRHNYEIDSKFKTKLETWDTFIRKLVRS
HHCEEECCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA