Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is cotS [H]

Identifier: 28210034

GI number: 28210034

Start: 247225

End: 248241

Strand: Direct

Name: cotS [H]

Synonym: CTC00271

Alternate gene names: 28210034

Gene position: 247225-248241 (Clockwise)

Preceding gene: 28210033

Following gene: 28210036

Centisome position: 8.83

GC content: 25.76

Gene sequence:

>1017_bases
ATGAAAGGAATATATTCTACTAGGAATTACTTGGCACAATATGACTTAGATTCAACATTGTTTGAAAATTTTAAGGTAAA
GCCTAAGGAAGTTTTACCTTTAAGAAGTGTTTTTATAATAAGTGATGAAACTGGAGAAAAAATTCTAAAGAAAGTAAATT
ATACTGTGGATGAGTTAGAGTTTATAAAAAAGGGATTAAATTATGTAAACAGAAGTTTTAATAGAACCATAAACTTCTTA
GAAACAAAAGATAATAAACCATATGTTATTTGGAATGATTCCATATATTGTATGATGAACTTAGTAGAAGGAAGAGAAAG
TGATTATAGTAATCCTATGGATTTAATCGTAGCTACAGAAGCTTTGGCAGAATTACATTATGCAGGAAAAGGATTTTATA
GCGATATACAATCTAAAAATAATCTAGGAAAGATTATTAAAAATTTCAAAAGAAAAGAAAGGGAAATGGAACTTTTTAGA
GAGTTAGCTTTAATTTATAATAATAAGAGTAAATTTAATAATATATTTATAGAGAATGCAGATTATTTAATAGATAAAAT
AAAAAAGAGTATAAAAATATTAGAAAACTCATGCTACTATAAATTATGTAGCATGGAGGAAAAAAGAGTGTTTTGTCATC
ATGATTTAGCCTATCATAATATTATAATTAATAAGGATAAGGGATATTTTGTAGATTTTGACTATGCTATAGTAGATTTG
AGAGTACATGATTTATGTAATTTCATAACTAAATGGGTAAAGAGCTCTGCTTATGATATAGAAAAATGTTCTAAAATATT
AGAAGTATATAACAAAATGAACCCTCTAAATGGCAAGGAAATAGAGGTGTTATATGGCATGCTTACTTTCCCACAGGAAA
TATTTAGTATAGTAAAAGGTTATTACACTGAAAATAAAAATTGGTCTGAAGAAAGCTCCATAGATAAATTAAAAAAGAAA
ATCGATTTAGAAGAATTTAAAGAGGATTTCTTGAAAGATTTTCAAGGCTTTATATGA

Upstream 100 bases:

>100_bases
TATAGATATGACAGAAAAAGTTTAAGTGATTATGAGTACTTAGTAATATTGGAAAAATTAATTGAACAAAAAGATTTGAT
TTCAATATAGGGGTGGTGGA

Downstream 100 bases:

>100_bases
TAAAAGAGGTATCTAAAAGGTAATTTTAAAATTACCTTTTAGATACCTTCTACTTGTTTACTATATTCATTATTTATAAT
TTGAGAGTATGCACTTATAG

Product: spore coat protein S

Products: NA

Alternate protein names: Coat protein 40 kDa component 2; COT40-2 [H]

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MKGIYSTRNYLAQYDLDSTLFENFKVKPKEVLPLRSVFIISDETGEKILKKVNYTVDELEFIKKGLNYVNRSFNRTINFL
ETKDNKPYVIWNDSIYCMMNLVEGRESDYSNPMDLIVATEALAELHYAGKGFYSDIQSKNNLGKIIKNFKRKEREMELFR
ELALIYNNKSKFNNIFIENADYLIDKIKKSIKILENSCYYKLCSMEEKRVFCHHDLAYHNIIINKDKGYFVDFDYAIVDL
RVHDLCNFITKWVKSSAYDIEKCSKILEVYNKMNPLNGKEIEVLYGMLTFPQEIFSIVKGYYTENKNWSEESSIDKLKKK
IDLEEFKEDFLKDFQGFI

Sequences:

>Translated_338_residues
MKGIYSTRNYLAQYDLDSTLFENFKVKPKEVLPLRSVFIISDETGEKILKKVNYTVDELEFIKKGLNYVNRSFNRTINFL
ETKDNKPYVIWNDSIYCMMNLVEGRESDYSNPMDLIVATEALAELHYAGKGFYSDIQSKNNLGKIIKNFKRKEREMELFR
ELALIYNNKSKFNNIFIENADYLIDKIKKSIKILENSCYYKLCSMEEKRVFCHHDLAYHNIIINKDKGYFVDFDYAIVDL
RVHDLCNFITKWVKSSAYDIEKCSKILEVYNKMNPLNGKEIEVLYGMLTFPQEIFSIVKGYYTENKNWSEESSIDKLKKK
IDLEEFKEDFLKDFQGFI
>Mature_338_residues
MKGIYSTRNYLAQYDLDSTLFENFKVKPKEVLPLRSVFIISDETGEKILKKVNYTVDELEFIKKGLNYVNRSFNRTINFL
ETKDNKPYVIWNDSIYCMMNLVEGRESDYSNPMDLIVATEALAELHYAGKGFYSDIQSKNNLGKIIKNFKRKEREMELFR
ELALIYNNKSKFNNIFIENADYLIDKIKKSIKILENSCYYKLCSMEEKRVFCHHDLAYHNIIINKDKGYFVDFDYAIVDL
RVHDLCNFITKWVKSSAYDIEKCSKILEVYNKMNPLNGKEIEVLYGMLTFPQEIFSIVKGYYTENKNWSEESSIDKLKKK
IDLEEFKEDFLKDFQGFI

Specific function: Seems to be required for the assembly of the CotSA protein in spores [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Spore wall, spore coat [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CotS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014255 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40061; Mature: 40061

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: PS00109 PROTEIN_KINASE_TYR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGIYSTRNYLAQYDLDSTLFENFKVKPKEVLPLRSVFIISDETGEKILKKVNYTVDELE
CCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHCCCEEEEEEECCHHHHHHHHHCCCHHHHH
FIKKGLNYVNRSFNRTINFLETKDNKPYVIWNDSIYCMMNLVEGRESDYSNPMDLIVATE
HHHHHHHHHHHHHHHHEEEEEECCCCCEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHH
ALAELHYAGKGFYSDIQSKNNLGKIIKNFKRKEREMELFRELALIYNNKSKFNNIFIENA
HHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEECCH
DYLIDKIKKSIKILENSCYYKLCSMEEKRVFCHHDLAYHNIIINKDKGYFVDFDYAIVDL
HHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHCCHHEEEEEEECCCCEEEEECCEEEHH
RVHDLCNFITKWVKSSAYDIEKCSKILEVYNKMNPLNGKEIEVLYGMLTFPQEIFSIVKG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
YYTENKNWSEESSIDKLKKKIDLEEFKEDFLKDFQGFI
HHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKGIYSTRNYLAQYDLDSTLFENFKVKPKEVLPLRSVFIISDETGEKILKKVNYTVDELE
CCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHCCCEEEEEEECCHHHHHHHHHCCCHHHHH
FIKKGLNYVNRSFNRTINFLETKDNKPYVIWNDSIYCMMNLVEGRESDYSNPMDLIVATE
HHHHHHHHHHHHHHHHEEEEEECCCCCEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHH
ALAELHYAGKGFYSDIQSKNNLGKIIKNFKRKEREMELFRELALIYNNKSKFNNIFIENA
HHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEECCH
DYLIDKIKKSIKILENSCYYKLCSMEEKRVFCHHDLAYHNIIINKDKGYFVDFDYAIVDL
HHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHCCHHEEEEEEECCCCEEEEECCEEEHH
RVHDLCNFITKWVKSSAYDIEKCSKILEVYNKMNPLNGKEIEVLYGMLTFPQEIFSIVKG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
YYTENKNWSEESSIDKLKKKIDLEEFKEDFLKDFQGFI
HHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7545510; 9387221; 9384377; 8289687 [H]