| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is cotI [H]
Identifier: 28210036
GI number: 28210036
Start: 249564
End: 250577
Strand: Direct
Name: cotI [H]
Synonym: CTC00273
Alternate gene names: 28210036
Gene position: 249564-250577 (Clockwise)
Preceding gene: 28210034
Following gene: 28210037
Centisome position: 8.92
GC content: 28.21
Gene sequence:
>1014_bases GTGATTACTATGATGAGGGAATTTGAAATAGAAAGACAGTTTGATATTAAAATTGAAAAACTTAAACCTAATAAGGGAGT GTATTTTTTAAGAACTAATGAAGGCACAAGGTGCCTAAAAAAAATTAACTATGGTATTCAAAAGTTATTGTTTGTTTATG GTGCAAAAGAGCATCTTGTTAAGAATGGATTTCCTAAAGTTGATAGATATTATATGAACACTTATGGAGAGCCCTTTGCC ATTGTAAATGAAGATATCTATACATTATCTGAATGGATAGATGGAAGAGAGGCGGATTTTAAGAATAAAGAAGATGTAGC TAATGCAGCTAAAAGCTTAGCACATATGCATATAGCCTCTAAAGGGTATGAACCTCCTGAAAATAGCAAATTAAAGACAG ATCTTTGGAGATGGCCAAGTCTTATGAATAAAAGGGTTAGAGCGTTAGAAAAAATGCGTCATATGACTAGAAAAAGAAAT AATAAAAACGAGTTTGAAATGAATTATATAAAAAATGTTCAATTCTATAAAGATTTAGGAATAAGAGCTATAAATGTATT AGAAAGTTCAGCCTATGAGGATTTATGTAAAATATCCGAAGAGGATAAAAATTTTTGCCACCATGATTATACCTATCATA ATATAATAATAGACGAAGATGATTCTATAAACGTAATAGACTTTGATTATTGTAAAAGAGAGATAAGAGCATATGATATA TCTTCTTTTATGATAAAAGTGTTAAAGAGAGTAGATTGGGATATAGAATATGCTAAATTGATATTAGAATCTTATAATAA AGAATATCCCCTGAGAGAAGAAGAATACAGAGTTTTATTTGCATTTTTATTATTTCCTCAAAGATTTTGGAGATTATCTA ATAGATATTTTTATAATGAAACAAATTGGGCTACAAAATCTTTTGATAGGAAAATGAGTAGGTTAATAGATGAACAAGAT GCGTATATGAAGTTTATAGAAAATTTTAAAACTGATTATGACCAAAAAGAGTAA
Upstream 100 bases:
>100_bases ATATTTCATTATATTAATATGTTACATAAAGTGTTAATAATATAAAATTTTATTACTGTTCTTCTAAAATTTATAAAGAA TACATATAGATTATAGAGAG
Downstream 100 bases:
>100_bases ATATTTATTATATGTTCTATATAAAACCCATGTAAAATATTTTTACGTGGGTTTTATATTTAATAAGTATAATTTTTGCA AATTTACTTTAGATAAAGAT
Product: spore coat protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MITMMREFEIERQFDIKIEKLKPNKGVYFLRTNEGTRCLKKINYGIQKLLFVYGAKEHLVKNGFPKVDRYYMNTYGEPFA IVNEDIYTLSEWIDGREADFKNKEDVANAAKSLAHMHIASKGYEPPENSKLKTDLWRWPSLMNKRVRALEKMRHMTRKRN NKNEFEMNYIKNVQFYKDLGIRAINVLESSAYEDLCKISEEDKNFCHHDYTYHNIIIDEDDSINVIDFDYCKREIRAYDI SSFMIKVLKRVDWDIEYAKLILESYNKEYPLREEEYRVLFAFLLFPQRFWRLSNRYFYNETNWATKSFDRKMSRLIDEQD AYMKFIENFKTDYDQKE
Sequences:
>Translated_337_residues MITMMREFEIERQFDIKIEKLKPNKGVYFLRTNEGTRCLKKINYGIQKLLFVYGAKEHLVKNGFPKVDRYYMNTYGEPFA IVNEDIYTLSEWIDGREADFKNKEDVANAAKSLAHMHIASKGYEPPENSKLKTDLWRWPSLMNKRVRALEKMRHMTRKRN NKNEFEMNYIKNVQFYKDLGIRAINVLESSAYEDLCKISEEDKNFCHHDYTYHNIIIDEDDSINVIDFDYCKREIRAYDI SSFMIKVLKRVDWDIEYAKLILESYNKEYPLREEEYRVLFAFLLFPQRFWRLSNRYFYNETNWATKSFDRKMSRLIDEQD AYMKFIENFKTDYDQKE >Mature_337_residues MITMMREFEIERQFDIKIEKLKPNKGVYFLRTNEGTRCLKKINYGIQKLLFVYGAKEHLVKNGFPKVDRYYMNTYGEPFA IVNEDIYTLSEWIDGREADFKNKEDVANAAKSLAHMHIASKGYEPPENSKLKTDLWRWPSLMNKRVRALEKMRHMTRKRN NKNEFEMNYIKNVQFYKDLGIRAINVLESSAYEDLCKISEEDKNFCHHDYTYHNIIIDEDDSINVIDFDYCKREIRAYDI SSFMIKVLKRVDWDIEYAKLILESYNKEYPLREEEYRVLFAFLLFPQRFWRLSNRYFYNETNWATKSFDRKMSRLIDEQD AYMKFIENFKTDYDQKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Spore wall, spore coat [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CotS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 - InterPro: IPR014255 [H]
Pfam domain/function: PF01636 APH [H]
EC number: NA
Molecular weight: Translated: 40923; Mature: 40923
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITMMREFEIERQFDIKIEKLKPNKGVYFLRTNEGTRCLKKINYGIQKLLFVYGAKEHLV CCCCHHHHCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHH KNGFPKVDRYYMNTYGEPFAIVNEDIYTLSEWIDGREADFKNKEDVANAAKSLAHMHIAS HCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH KGYEPPENSKLKTDLWRWPSLMNKRVRALEKMRHMTRKRNNKNEFEMNYIKNVQFYKDLG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC IRAINVLESSAYEDLCKISEEDKNFCHHDYTYHNIIIDEDDSINVIDFDYCKREIRAYDI HHHHHHHHHHHHHHHHHCCHHHCCHHCCCCEEEEEEEECCCCCEEEEHHHHHHHHHHHHH SSFMIKVLKRVDWDIEYAKLILESYNKEYPLREEEYRVLFAFLLFPQRFWRLSNRYFYNE HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECC TNWATKSFDRKMSRLIDEQDAYMKFIENFKTDYDQKE CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MITMMREFEIERQFDIKIEKLKPNKGVYFLRTNEGTRCLKKINYGIQKLLFVYGAKEHLV CCCCHHHHCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHH KNGFPKVDRYYMNTYGEPFAIVNEDIYTLSEWIDGREADFKNKEDVANAAKSLAHMHIAS HCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH KGYEPPENSKLKTDLWRWPSLMNKRVRALEKMRHMTRKRNNKNEFEMNYIKNVQFYKDLG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC IRAINVLESSAYEDLCKISEEDKNFCHHDYTYHNIIIDEDDSINVIDFDYCKREIRAYDI HHHHHHHHHHHHHHHHHCCHHHCCHHCCCCEEEEEEEECCCCCEEEEHHHHHHHHHHHHH SSFMIKVLKRVDWDIEYAKLILESYNKEYPLREEEYRVLFAFLLFPQRFWRLSNRYFYNE HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECC TNWATKSFDRKMSRLIDEQDAYMKFIENFKTDYDQKE CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7545510; 9387221; 9384377 [H]