| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210033
Identifier: 28210033
GI number: 28210033
Start: 246444
End: 247214
Strand: Direct
Name: 28210033
Synonym: CTC00270
Alternate gene names: NA
Gene position: 246444-247214 (Clockwise)
Preceding gene: 28210032
Following gene: 28210034
Centisome position: 8.8
GC content: 22.57
Gene sequence:
>771_bases ATGGAAGCGGAGGGTGTTATGATTAGAGAAAATGCTTTTTTAGAGTATTTAAAAGATATAAATATATTTGTAGATGAATC TATAGGTTCTGACATTAAAGTTAAAAATGTAGATGAGACTAAATTAGAAAAACAATTATATATAATAAATGATTTTCATA AAAGGATTATGGGATATAAGAATATAAAAGATAGATTAGATAGTGGGATTGGGAAAACAGTAGAAGAATATAAAGTGTAT ATAAAAAAAGTAAATAGAGATTTAAAAAGAATTAAATCAGAAGGACCTAGGAATGCCTTTGAAAATAAATTTTTAGAAGT AGGAGAAGAACATATAGAAAAAGGAAAAGCAGCTATTAAAAATATATATAAAAATGACTACTATTCATTAATAACTAGAA GCATGCAAAATAAAGAAATAATATTAGACAAAGTAGATTTTAAGCATTTGATAAAAGAAGAAGAATTCATAAAGGTAAAA ACTATAAGTAAATGTAAATATAATTTAGTAGAAATGGATTGTTTTTATCTATTATCTAGATATAAAAGAAAAGGAGTTAA TTTAAATTATTATATGTTAATAGATAGATTTTGCCATATGGAGAATTTAGGACAAAGCAGTTATCAATTTATATTATCAC TTTTATCATTTCCTTATGAGTTTGTAAAGACAATTATTAACTATAGATATGACAGAAAAAGTTTAAGTGATTATGAGTAC TTAGTAATATTGGAAAAATTAATTGAACAAAAAGATTTGATTTCAATATAG
Upstream 100 bases:
>100_bases CAACCTTGGAAGGAAAAAGTTTTTATAAATAAAATAAAAAGAATAGTGGATGACAGAGAAGCAAAACAGGAATTTGTAGA GGAGTTTAGATGTATAAACT
Downstream 100 bases:
>100_bases GGGTGGTGGAATGAAAGGAATATATTCTACTAGGAATTACTTGGCACAATATGACTTAGATTCAACATTGTTTGAAAATT TTAAGGTAAAGCCTAAGGAA
Product: putative spore coat protein
Products: NA
Alternate protein names: Spore Coat Protein CotS
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MEAEGVMIRENAFLEYLKDINIFVDESIGSDIKVKNVDETKLEKQLYIINDFHKRIMGYKNIKDRLDSGIGKTVEEYKVY IKKVNRDLKRIKSEGPRNAFENKFLEVGEEHIEKGKAAIKNIYKNDYYSLITRSMQNKEIILDKVDFKHLIKEEEFIKVK TISKCKYNLVEMDCFYLLSRYKRKGVNLNYYMLIDRFCHMENLGQSSYQFILSLLSFPYEFVKTIINYRYDRKSLSDYEY LVILEKLIEQKDLISI
Sequences:
>Translated_256_residues MEAEGVMIRENAFLEYLKDINIFVDESIGSDIKVKNVDETKLEKQLYIINDFHKRIMGYKNIKDRLDSGIGKTVEEYKVY IKKVNRDLKRIKSEGPRNAFENKFLEVGEEHIEKGKAAIKNIYKNDYYSLITRSMQNKEIILDKVDFKHLIKEEEFIKVK TISKCKYNLVEMDCFYLLSRYKRKGVNLNYYMLIDRFCHMENLGQSSYQFILSLLSFPYEFVKTIINYRYDRKSLSDYEY LVILEKLIEQKDLISI >Mature_256_residues MEAEGVMIRENAFLEYLKDINIFVDESIGSDIKVKNVDETKLEKQLYIINDFHKRIMGYKNIKDRLDSGIGKTVEEYKVY IKKVNRDLKRIKSEGPRNAFENKFLEVGEEHIEKGKAAIKNIYKNDYYSLITRSMQNKEIILDKVDFKHLIKEEEFIKVK TISKCKYNLVEMDCFYLLSRYKRKGVNLNYYMLIDRFCHMENLGQSSYQFILSLLSFPYEFVKTIINYRYDRKSLSDYEY LVILEKLIEQKDLISI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30618; Mature: 30618
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAEGVMIRENAFLEYLKDINIFVDESIGSDIKVKNVDETKLEKQLYIINDFHKRIMGYK CCCCCEEEHHHHHHHHHHHHHHEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCHH NIKDRLDSGIGKTVEEYKVYIKKVNRDLKRIKSEGPRNAFENKFLEVGEEHIEKGKAAIK HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH NIYKNDYYSLITRSMQNKEIILDKVDFKHLIKEEEFIKVKTISKCKYNLVEMDCFYLLSR HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YKRKGVNLNYYMLIDRFCHMENLGQSSYQFILSLLSFPYEFVKTIINYRYDRKSLSDYEY HHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHH LVILEKLIEQKDLISI HHHHHHHHHHHHHCCC >Mature Secondary Structure MEAEGVMIRENAFLEYLKDINIFVDESIGSDIKVKNVDETKLEKQLYIINDFHKRIMGYK CCCCCEEEHHHHHHHHHHHHHHEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCHH NIKDRLDSGIGKTVEEYKVYIKKVNRDLKRIKSEGPRNAFENKFLEVGEEHIEKGKAAIK HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH NIYKNDYYSLITRSMQNKEIILDKVDFKHLIKEEEFIKVKTISKCKYNLVEMDCFYLLSR HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YKRKGVNLNYYMLIDRFCHMENLGQSSYQFILSLLSFPYEFVKTIINYRYDRKSLSDYEY HHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHH LVILEKLIEQKDLISI HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA