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The map label for this gene is 28210008

Identifier: 28210008

GI number: 28210008

Start: 210458

End: 211024

Strand: Direct

Name: 28210008

Synonym: CTC00242

Alternate gene names: NA

Gene position: 210458-211024 (Clockwise)

Preceding gene: 28210007

Following gene: 28210009

Centisome position: 7.52

GC content: 33.86

Gene sequence:

>567_bases
GTGTTAGGGTGGAAAGAACTACATAATAATTGTTTGGCTTGTAACAAGTGTGATTTATCTAAAAATAGAACTCATATGGT
TTTTGGAGAAGGAAATTCTAAGGCTGATATAATGTTTATTGGTGAAGCTCCAGGAGGAGACGAAGATAAAACGGGGAGAC
CCTTTGTAGGTAGGGCAGGACAGTTTCTTACAAAGATGTTGAATAGCTTAGACTTAATACGAGAAAGAGATTATTATATA
TGTAATATTTGTAAATGTAGACCTGAAAACAACAGAAATCCTAAAGAAGATGAAATTAAAGCTTGTATACCTTATTTAAG
AAATCAATTTGCACTAGTTCAGCCTAGAATAATAGTATGTTTAGGTGCTATAGCTACTAATCAGATTATAAGTGATCAAT
GGAGAATAACTAGGGATAGAGGAAAGTGGATAAAAAGAAAAGGGTGCTTTATCACAGCCACTTTTCATCCAGCAGCGGTA
TTACGAGATGAAGGGAAAAAGCAGTATATTTTCAGAGATTTACAAGAAGTGAAAAAGGCATATGAGAGTTTAAGAAAAGT
TGACTAG

Upstream 100 bases:

>100_bases
ATTTTCATGTATAATTTCTTGAAAAATAAAGGAGTATCTATGTTTAATGATATCGAAGTTTAGTTTAAATTTGTGAAATA
TTTGTTTGGAGTGAAGTTTT

Downstream 100 bases:

>100_bases
TTAGAAATTTCAAATATAATTAGTATAAAATTAGTTGACATTGTAAAATATATATAATATTATTACTTTGAACCATGATA
TTAAAATGCAATGAAAGGAA

Product: DNA polymerase

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; Uracil DNA Glycosylase Superfamily Protein; DNA-Directed DNA Polymerase; Phage Spo1 DNA Polymerase-Related Protein; DNA Polymerase-Related Protein Bacteriophage-Type; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; Uracil-DNA Glycosylase Family 4 Protein; DNA Polymerase-Related Protein; Bacteriophage-Related DNA Polymerase; DNA Polymerase Bacteriophage-Type; Phage SPO1 DNA Polymerase Domain-Containing Protein; Uracil-DNA Glycosylase Phage-Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Phage Shock Protein E; DNA Polymerase Domain-Containing Protein; Uracil-DNA Glycosylase-Related Protein; Phage SpO1 DNA Polymerase-Related Protein; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage DNA Polymerase; Phage Spo1 DNA Polymerase Domain Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Phage Related DNA Polymerase; Bacteriophage-Type DNA Polymerase; Uracil-DNA Glycosylase-Like Protein; DNA Polymerase Related Protein; Uracil DNA Glycosylase; Fis Family Transcriptional Regulator; DNA Glycosylase; Phage DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MLGWKELHNNCLACNKCDLSKNRTHMVFGEGNSKADIMFIGEAPGGDEDKTGRPFVGRAGQFLTKMLNSLDLIRERDYYI
CNICKCRPENNRNPKEDEIKACIPYLRNQFALVQPRIIVCLGAIATNQIISDQWRITRDRGKWIKRKGCFITATFHPAAV
LRDEGKKQYIFRDLQEVKKAYESLRKVD

Sequences:

>Translated_188_residues
MLGWKELHNNCLACNKCDLSKNRTHMVFGEGNSKADIMFIGEAPGGDEDKTGRPFVGRAGQFLTKMLNSLDLIRERDYYI
CNICKCRPENNRNPKEDEIKACIPYLRNQFALVQPRIIVCLGAIATNQIISDQWRITRDRGKWIKRKGCFITATFHPAAV
LRDEGKKQYIFRDLQEVKKAYESLRKVD
>Mature_188_residues
MLGWKELHNNCLACNKCDLSKNRTHMVFGEGNSKADIMFIGEAPGGDEDKTGRPFVGRAGQFLTKMLNSLDLIRERDYYI
CNICKCRPENNRNPKEDEIKACIPYLRNQFALVQPRIIVCLGAIATNQIISDQWRITRDRGKWIKRKGCFITATFHPAAV
LRDEGKKQYIFRDLQEVKKAYESLRKVD

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 21686; Mature: 21686

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGWKELHNNCLACNKCDLSKNRTHMVFGEGNSKADIMFIGEAPGGDEDKTGRPFVGRAG
CCCHHHHHCCCEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHH
QFLTKMLNSLDLIRERDYYICNICKCRPENNRNPKEDEIKACIPYLRNQFALVQPRIIVC
HHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHCCCHHHHH
LGAIATNQIISDQWRITRDRGKWIKRKGCFITATFHPAAVLRDEGKKQYIFRDLQEVKKA
HHHHHHHHHHHCCCEEECCHHHHHHCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHHHHH
YESLRKVD
HHHHHCCC
>Mature Secondary Structure
MLGWKELHNNCLACNKCDLSKNRTHMVFGEGNSKADIMFIGEAPGGDEDKTGRPFVGRAG
CCCHHHHHCCCEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHH
QFLTKMLNSLDLIRERDYYICNICKCRPENNRNPKEDEIKACIPYLRNQFALVQPRIIVC
HHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHCCCHHHHH
LGAIATNQIISDQWRITRDRGKWIKRKGCFITATFHPAAVLRDEGKKQYIFRDLQEVKKA
HHHHHHHHHHHCCCEEECCHHHHHHCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHHHHH
YESLRKVD
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA