| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is pfkA [H]
Identifier: 28198149
GI number: 28198149
Start: 282692
End: 283975
Strand: Reverse
Name: pfkA [H]
Synonym: PD0221
Alternate gene names: 28198149
Gene position: 283975-282692 (Counterclockwise)
Preceding gene: 28198152
Following gene: 28198148
Centisome position: 11.27
GC content: 55.45
Gene sequence:
>1284_bases ATGTCCTCGCACTACAAGAGCTCGTCCCACATGGCAAAAGAGACGTTGTTATACGCCCAATCCGGCGGCGTTACCGCTGT TATCAACGCAACCGCCGCCGCGGTCATCACCGAAGCACGGTCACACCGCATTAAAGTCCTCGCCGCACGCAATGGCATCC TCGGTGCACTGCGTGAAGACCTGATCGATACATCCAAAGAATCAATCACGGCAATCCGTGCCTTGACCCATACCCCAGGA GGCGCATTTGGCTCGTGCCGTTTCAAGCTCAAATCGCTTGAAGCCGATCACGAAAAATACGAACGGTTACTTGAAGTATT CAAAGCACATAACGTGCGCTGGTTCCTCTACAACGGTGGTAATGACTCCGCCGATACAGCGCTCAAAGTCTCACAGTTAG CCAAAACATTTGACTATCCACTGCACTGTATCGGCGTCCCTAAAACCATCGACAACGATTTGGCGATCACCGACGCCAGC CCCGGCTTCGGTTCAGCCGCAAAGTACACTGCTGTCTCCATATGCGAAGCCGCGCGGGATGTCGCAGCGATGGCCGAGAC CTCAACTAAGGTTTTCATTTACGAAGCAATGGGCCGCCATGCCGGTTGGCTCGCTGCGGCTGCTGGCTTGGCCGGCCAAG GGCAGGAAGAAGCCCCCCACATCATCCTGCTCCCTGAACGCACCTACGACGAAACAGCATTTCTGGCGAAAGTCCAACAG GTAGTCGACCGAGTCGGTTGGTGCGTAGTAGTCGCCAGCGAAGGTATCCGCAGCAATGATGGGCGCTTCGTTGCCGATGC TGGCGGCACCACTGATGCCTTTGGTCACACGCAACTTGGCGGCGTCGCCGCTTACCTCGCCAACCGAGTGAAACAGGCAC TCGGACTCAAAGTGCACTGGACGCTGCCAGATTACCTACAACGCTCCGCAAGGCACATCGCCTCCAAAACAGACTGGGAA CAAGCACAGGCTGTGGGTAAAGCTGCAGTGCACTACGCACTGGAAGGCATGAATGCAGTCATGCCTGTCATCGTACGCAC CTCTGACACCCCATACCGTTGGAAAATCGAGCCGGCAGCACTCACCAAGATTGCCAATCACGAAAAAACCTTACCAGCAA GCTTCTTACGCCGTGACGGCTTCGGCATCAGCGAACGTGCACGCACCTACTTTGAACCATTGATTCGTGGCGAAGCACCC ATGCCCTACGAACGCAACGGATTACCGCGACACGTCCATCTGAAAAATCAAAGCGTACAGAAACGGCTACCTGCCTGGGA ATAA
Upstream 100 bases:
>100_bases ATAGAAAAAAAACAACGGCAAGCGGGGTTACACTTCGACCCTCTGCCTACACCGCACCATGATGCCGCGCAGCTTAACGC ATCCAAGCGATGTCCCGGCA
Downstream 100 bases:
>100_bases CACCCCTCACTGGTCACCTACAGTCTGCTTACTGACTTGAAACGTCATTGAAGGCCCAATCACCGAAAATTCCGCTTGCT TCCAGCAAGCGGTGATAGCG
Product: 6-phosphofructokinase
Products: NA
Alternate protein names: 6-phosphofructokinase, pyrophosphate dependent; PPi-dependent phosphofructokinase; PPi-PFK; Pyrophosphate-dependent 6-phosphofructose-1-kinase [H]
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MSSHYKSSSHMAKETLLYAQSGGVTAVINATAAAVITEARSHRIKVLAARNGILGALREDLIDTSKESITAIRALTHTPG GAFGSCRFKLKSLEADHEKYERLLEVFKAHNVRWFLYNGGNDSADTALKVSQLAKTFDYPLHCIGVPKTIDNDLAITDAS PGFGSAAKYTAVSICEAARDVAAMAETSTKVFIYEAMGRHAGWLAAAAGLAGQGQEEAPHIILLPERTYDETAFLAKVQQ VVDRVGWCVVVASEGIRSNDGRFVADAGGTTDAFGHTQLGGVAAYLANRVKQALGLKVHWTLPDYLQRSARHIASKTDWE QAQAVGKAAVHYALEGMNAVMPVIVRTSDTPYRWKIEPAALTKIANHEKTLPASFLRRDGFGISERARTYFEPLIRGEAP MPYERNGLPRHVHLKNQSVQKRLPAWE
Sequences:
>Translated_427_residues MSSHYKSSSHMAKETLLYAQSGGVTAVINATAAAVITEARSHRIKVLAARNGILGALREDLIDTSKESITAIRALTHTPG GAFGSCRFKLKSLEADHEKYERLLEVFKAHNVRWFLYNGGNDSADTALKVSQLAKTFDYPLHCIGVPKTIDNDLAITDAS PGFGSAAKYTAVSICEAARDVAAMAETSTKVFIYEAMGRHAGWLAAAAGLAGQGQEEAPHIILLPERTYDETAFLAKVQQ VVDRVGWCVVVASEGIRSNDGRFVADAGGTTDAFGHTQLGGVAAYLANRVKQALGLKVHWTLPDYLQRSARHIASKTDWE QAQAVGKAAVHYALEGMNAVMPVIVRTSDTPYRWKIEPAALTKIANHEKTLPASFLRRDGFGISERARTYFEPLIRGEAP MPYERNGLPRHVHLKNQSVQKRLPAWE >Mature_426_residues SSHYKSSSHMAKETLLYAQSGGVTAVINATAAAVITEARSHRIKVLAARNGILGALREDLIDTSKESITAIRALTHTPGG AFGSCRFKLKSLEADHEKYERLLEVFKAHNVRWFLYNGGNDSADTALKVSQLAKTFDYPLHCIGVPKTIDNDLAITDASP GFGSAAKYTAVSICEAARDVAAMAETSTKVFIYEAMGRHAGWLAAAAGLAGQGQEEAPHIILLPERTYDETAFLAKVQQV VDRVGWCVVVASEGIRSNDGRFVADAGGTTDAFGHTQLGGVAAYLANRVKQALGLKVHWTLPDYLQRSARHIASKTDWEQ AQAVGKAAVHYALEGMNAVMPVIVRTSDTPYRWKIEPAALTKIANHEKTLPASFLRRDGFGISERARTYFEPLIRGEAPM PYERNGLPRHVHLKNQSVQKRLPAWE
Specific function: Key control step of glycolysis. [C]
COG id: COG0205
COG function: function code G; 6-phosphofructokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphofructokinase family [H]
Homologues:
Organism=Escherichia coli, GI1790350, Length=221, Percent_Identity=25.3393665158371, Blast_Score=69, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6321679, Length=214, Percent_Identity=30.3738317757009, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: 3981 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 950 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012003 - InterPro: IPR012829 - InterPro: IPR022953 - InterPro: IPR015912 - InterPro: IPR000023 [H]
Pfam domain/function: PF00365 PFK [H]
EC number: =2.7.1.90 [H]
Molecular weight: Translated: 46564; Mature: 46433
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSHYKSSSHMAKETLLYAQSGGVTAVINATAAAVITEARSHRIKVLAARNGILGALRED CCCCCCCHHHHHHHHEEEECCCCEEEEEEHHHHHHHHHHCCCEEEEEEECCCHHHHHHHH LIDTSKESITAIRALTHTPGGAFGSCRFKLKSLEADHEKYERLLEVFKAHNVRWFLYNGG HHHCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEEECC NDSADTALKVSQLAKTFDYPLHCIGVPKTIDNDLAITDASPGFGSAAKYTAVSICEAARD CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH VAAMAETSTKVFIYEAMGRHAGWLAAAAGLAGQGQEEAPHIILLPERTYDETAFLAKVQQ HHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHH VVDRVGWCVVVASEGIRSNDGRFVADAGGTTDAFGHTQLGGVAAYLANRVKQALGLKVHW HHHHCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEE TLPDYLQRSARHIASKTDWEQAQAVGKAAVHYALEGMNAVMPVIVRTSDTPYRWKIEPAA CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECHHH LTKIANHEKTLPASFLRRDGFGISERARTYFEPLIRGEAPMPYERNGLPRHVHLKNQSVQ HHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHH KRLPAWE HCCCCCC >Mature Secondary Structure SSHYKSSSHMAKETLLYAQSGGVTAVINATAAAVITEARSHRIKVLAARNGILGALRED CCCCCCHHHHHHHHEEEECCCCEEEEEEHHHHHHHHHHCCCEEEEEEECCCHHHHHHHH LIDTSKESITAIRALTHTPGGAFGSCRFKLKSLEADHEKYERLLEVFKAHNVRWFLYNGG HHHCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEEECC NDSADTALKVSQLAKTFDYPLHCIGVPKTIDNDLAITDASPGFGSAAKYTAVSICEAARD CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH VAAMAETSTKVFIYEAMGRHAGWLAAAAGLAGQGQEEAPHIILLPERTYDETAFLAKVQQ HHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHH VVDRVGWCVVVASEGIRSNDGRFVADAGGTTDAFGHTQLGGVAAYLANRVKQALGLKVHW HHHHCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEE TLPDYLQRSARHIASKTDWEQAQAVGKAAVHYALEGMNAVMPVIVRTSDTPYRWKIEPAA CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECHHH LTKIANHEKTLPASFLRRDGFGISERARTYFEPLIRGEAPMPYERNGLPRHVHLKNQSVQ HHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHH KRLPAWE HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10913106 [H]