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The map label for this gene is yabI [H]

Identifier: 28198152

GI number: 28198152

Start: 286627

End: 288756

Strand: Reverse

Name: yabI [H]

Synonym: PD0224

Alternate gene names: 28198152

Gene position: 288756-286627 (Counterclockwise)

Preceding gene: 28198154

Following gene: 28198149

Centisome position: 11.46

GC content: 57.04

Gene sequence:

>2130_bases
GTGCAATCAAGCGACTTTCAGGGATGCCCCGCCGCTAGAAAAAAAGCGTATGACTTATCACCCTATAATTCCAACATGAA
TACACCCTGGATTACAGCAACACTGGCATGGATTGAACAACATCCTGCACTGGCCGGCTTGGTCATCTTTGCCATTGCTT
TTAGCGACGCAGTCATCATTCTCGGCGCAATCGTGCCAGCGCTGCCACTGCTATTTGCTGTTGGCGTGCTCATCGGGCTC
GACAAAATCAACGGCCTCTACGCAGTCGCATGCGCATCGCTAGGGGCATTCGCTGGTGATGCACTGAGTTTCTGGATTGG
CTATCGATGGGGCCATCGATTGCGCGAAATCTGGCCATTCAACCGCTATCCGCAATTACTGCACCGTGGTGAATCACTAT
TTCGCGGCAACGCATTCAAGAGCATCCTGGTGGCACGCTACGTCGGCGCGGTCCGTCCCTTCGTACCGGCCATCGCCGGC
ATGCTGCGCATGCCGCTCAAACACTACACCTTTGCCAGCGGCTTAGCGTGTCTGTCATGGGGCGCCCTGTTCCTGGCGCC
AGGCTGGCTGCTCGGCGAAGCCTACGACGCAGTGGCAGCCGTCGCCGGACGGCTCCTTCTGGTCATCGGATTACTCCTGC
TGGTCCTCGGAGTGGTCTGGGCAGTGGTGTTATACAGCTACCGCTGGGCAGCCAGGAATCTTGATCAGTCGATCGCCCGC
CTATTGGCCTGGTCGCATCGTCATCCCACTTTAGGACGCTGGTCAATCTCGGTCTTCGATCCCCAACGACGCGAGTCAGT
CCCCCTGGCAGTACTCGCGGTGATGCTGCTCCTGTTGGGCTGGGGCTGGTTCGCACTCCTCATGATCGTCCTGGTCCATG
GTGAACCACTACCGATGGATCTTGCAGTCAACAACATGATGTTGGCACTGCGCAATCCATTGGCAGACTACCCAATGACA
GCCTTAGCCTCACTAGGCGACTGGCAAATCCTACTGCCCGCCATTACCGTTGCGATGGCATATCTGGCGTGGCACAAACG
CTGGATGGCAGTACTGCACTGGTTGGCTGCACTCAGCTTTGGTCTGGCCTTCACTTGGTTGCTCGGCAAGACCATGCATG
TCGTGCAGCCGCCAGCCGCCAGCAGCGGCTTTGGCTTTCCGTCCGTTGCAGTCACGATCGTCACCATCACCTTAGGCTTC
TTTGCCGTACTGATCGCCCGGGAACTCCCCGGACGCAATCGGGTTTGGCCATACATGGTGACCGGCGCGCTCGCCTCTCT
GATTGGTTTCGCACGACTGTACCTAGGTGCACATTGGCTCAGCGATGTGCTCGGCGGCATGCTATTTGGCATCTTCTGGC
TCCTGGTACTGGGGATCGCTTATCGGCGACGCCTCACCCATGAACTTCAGGTCAACCCCTTAAGCTGGCTGTTTTATGGC
ACCTTCTCAATCGCTGCAATAGTGATGGCCCCCCGCCATCTAGAACAGAAGCTAACTAAGTTCGAACCGCCACCACCATC
ACCACGCACAATCGCTGCGGAAAGTTGGTGGAAAAATGACTGGCGTGAGCTGCCCGCGCGCCGTAACGAGTTCGACGATG
CAGAACGCTGGCCGCTCAACGTCCAAGTGGCCGGTTCACTGGTGCCATTGCAGCAACACTTGGAAACCCAGGGATGGCGA
CGCCAGCCGCAAGCCGGCTGGAAGGAAGCATTGCACTTGCTCGACGTAAATTCCCAACCCAATACTGTTCCGGTGCTGCC
GGCCACGTTGGACACACGCGTTGAAGCATTGCTGATGGTACGTAACAGCCCACATGCGGACGAATGCTATGTACTACGCC
TATGGCCAACAGCCACTCAATTGCAGCCGGAACAACAACCACTCTGGCTGGGATCGGTACAGACACTGCACTATGATCGC
CATTTCAGCTTAATGGGCCTCTGGTATCCGTTGCGTGGCGTGGACCTGGCACTGAAAGAATTGCAATCCTCACTCAGTGC
ATTGCACCATCGGGAAGAACACCACCCAGACACCAACACCCCGATACTGCTGATCGATAACCGGGCACCCACAGTCCCAA
CCGGTGCACCCACTATCCCTCAGGAACCGAGTGGCCTCCCTACAAGATAA

Upstream 100 bases:

>100_bases
AACTTCTCTCCCTTTCCATTTACCAGCAAAATACGGCCGAAACAATCGGCCTTCAGCGTTTCGGAGACAGAAAAAGGCCT
AGACATTCACACATTGTAGA

Downstream 100 bases:

>100_bases
GAAGTGACCGTTGAATCCTTCAGCCCGTCCCATTGATCAATCACCACGCCGCCCCTCAGCCGGGCGGCAGTAGAAACCAC
GCACATCATCTATAAAGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 709; Mature: 709

Protein sequence:

>709_residues
MQSSDFQGCPAARKKAYDLSPYNSNMNTPWITATLAWIEQHPALAGLVIFAIAFSDAVIILGAIVPALPLLFAVGVLIGL
DKINGLYAVACASLGAFAGDALSFWIGYRWGHRLREIWPFNRYPQLLHRGESLFRGNAFKSILVARYVGAVRPFVPAIAG
MLRMPLKHYTFASGLACLSWGALFLAPGWLLGEAYDAVAAVAGRLLLVIGLLLLVLGVVWAVVLYSYRWAARNLDQSIAR
LLAWSHRHPTLGRWSISVFDPQRRESVPLAVLAVMLLLLGWGWFALLMIVLVHGEPLPMDLAVNNMMLALRNPLADYPMT
ALASLGDWQILLPAITVAMAYLAWHKRWMAVLHWLAALSFGLAFTWLLGKTMHVVQPPAASSGFGFPSVAVTIVTITLGF
FAVLIARELPGRNRVWPYMVTGALASLIGFARLYLGAHWLSDVLGGMLFGIFWLLVLGIAYRRRLTHELQVNPLSWLFYG
TFSIAAIVMAPRHLEQKLTKFEPPPPSPRTIAAESWWKNDWRELPARRNEFDDAERWPLNVQVAGSLVPLQQHLETQGWR
RQPQAGWKEALHLLDVNSQPNTVPVLPATLDTRVEALLMVRNSPHADECYVLRLWPTATQLQPEQQPLWLGSVQTLHYDR
HFSLMGLWYPLRGVDLALKELQSSLSALHHREEHHPDTNTPILLIDNRAPTVPTGAPTIPQEPSGLPTR

Sequences:

>Translated_709_residues
MQSSDFQGCPAARKKAYDLSPYNSNMNTPWITATLAWIEQHPALAGLVIFAIAFSDAVIILGAIVPALPLLFAVGVLIGL
DKINGLYAVACASLGAFAGDALSFWIGYRWGHRLREIWPFNRYPQLLHRGESLFRGNAFKSILVARYVGAVRPFVPAIAG
MLRMPLKHYTFASGLACLSWGALFLAPGWLLGEAYDAVAAVAGRLLLVIGLLLLVLGVVWAVVLYSYRWAARNLDQSIAR
LLAWSHRHPTLGRWSISVFDPQRRESVPLAVLAVMLLLLGWGWFALLMIVLVHGEPLPMDLAVNNMMLALRNPLADYPMT
ALASLGDWQILLPAITVAMAYLAWHKRWMAVLHWLAALSFGLAFTWLLGKTMHVVQPPAASSGFGFPSVAVTIVTITLGF
FAVLIARELPGRNRVWPYMVTGALASLIGFARLYLGAHWLSDVLGGMLFGIFWLLVLGIAYRRRLTHELQVNPLSWLFYG
TFSIAAIVMAPRHLEQKLTKFEPPPPSPRTIAAESWWKNDWRELPARRNEFDDAERWPLNVQVAGSLVPLQQHLETQGWR
RQPQAGWKEALHLLDVNSQPNTVPVLPATLDTRVEALLMVRNSPHADECYVLRLWPTATQLQPEQQPLWLGSVQTLHYDR
HFSLMGLWYPLRGVDLALKELQSSLSALHHREEHHPDTNTPILLIDNRAPTVPTGAPTIPQEPSGLPTR
>Mature_709_residues
MQSSDFQGCPAARKKAYDLSPYNSNMNTPWITATLAWIEQHPALAGLVIFAIAFSDAVIILGAIVPALPLLFAVGVLIGL
DKINGLYAVACASLGAFAGDALSFWIGYRWGHRLREIWPFNRYPQLLHRGESLFRGNAFKSILVARYVGAVRPFVPAIAG
MLRMPLKHYTFASGLACLSWGALFLAPGWLLGEAYDAVAAVAGRLLLVIGLLLLVLGVVWAVVLYSYRWAARNLDQSIAR
LLAWSHRHPTLGRWSISVFDPQRRESVPLAVLAVMLLLLGWGWFALLMIVLVHGEPLPMDLAVNNMMLALRNPLADYPMT
ALASLGDWQILLPAITVAMAYLAWHKRWMAVLHWLAALSFGLAFTWLLGKTMHVVQPPAASSGFGFPSVAVTIVTITLGF
FAVLIARELPGRNRVWPYMVTGALASLIGFARLYLGAHWLSDVLGGMLFGIFWLLVLGIAYRRRLTHELQVNPLSWLFYG
TFSIAAIVMAPRHLEQKLTKFEPPPPSPRTIAAESWWKNDWRELPARRNEFDDAERWPLNVQVAGSLVPLQQHLETQGWR
RQPQAGWKEALHLLDVNSQPNTVPVLPATLDTRVEALLMVRNSPHADECYVLRLWPTATQLQPEQQPLWLGSVQTLHYDR
HFSLMGLWYPLRGVDLALKELQSSLSALHHREEHHPDTNTPILLIDNRAPTVPTGAPTIPQEPSGLPTR

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1786252, Length=165, Percent_Identity=31.5151515151515, Blast_Score=88, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 79027; Mature: 79027

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1630901; 9278503 [H]