| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28198148
Identifier: 28198148
GI number: 28198148
Start: 281703
End: 282278
Strand: Reverse
Name: 28198148
Synonym: PD0220
Alternate gene names: NA
Gene position: 282278-281703 (Counterclockwise)
Preceding gene: 28198149
Following gene: 28198147
Centisome position: 11.2
GC content: 52.78
Gene sequence:
>576_bases ATGCATCGTCATACCCTACTTGGCCTACTGTTGTTTCTATCCATCACAACCACAGCAGTAAATGCTGCTCCACAGATTCA TGGCCGCGAAATCATCATTCCAGCGGAGGACATACAACCCTTTGTCTCCAACCACTTCCCACAAACAAAAACACTGCTGG GCGGACTGATCGAACTAAGCACCAGCCAACCACGCATCGCAATTCCACCCGGTCACCGAATGACACTCTCATTCGACCTG GCGATCTCCAGCGGTGGCGGCCAACCATCCCCGCTAGGGCGGGTCGGACTGAGCAGCGCGATGTACTACGATACTGCACG CCAAGCATTCTTCCTTGATCAACCCACCCTGGAGCATTTCAAACCAGCACATTCTGGCATCGAACTTGATGAACAAATCC GTGAGTTCATCAACACCTGGTTGCAAGACTATGCTCGCCGCGAACCGGTGTACCAGCTCAGTCCAGCACTGACCGCCATG CTAGGAAACGTCCATTTGCAATCCTCCACGATCACTAATGGCCACTTCTCACTGACCTTTGACCGCGACATCTCACCGCT CATACCAGACAATTGA
Upstream 100 bases:
>100_bases GATGACCTATGCCTCCATCAACAGGCGCTGCAATCACAGACAGCACGCCTTTAAAATCGTCCCACACCAACAATCGACAC ACATACGATCACATCATTCC
Downstream 100 bases:
>100_bases AAAACAAATCACAACATCGCACGCGCAGTACATCGCAGCATAGAGACACATCATCCAACTAAACTGTAAAGAAAGACAGA ACGTTGCTGGCACTGATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MHRHTLLGLLLFLSITTTAVNAAPQIHGREIIIPAEDIQPFVSNHFPQTKTLLGGLIELSTSQPRIAIPPGHRMTLSFDL AISSGGGQPSPLGRVGLSSAMYYDTARQAFFLDQPTLEHFKPAHSGIELDEQIREFINTWLQDYARREPVYQLSPALTAM LGNVHLQSSTITNGHFSLTFDRDISPLIPDN
Sequences:
>Translated_191_residues MHRHTLLGLLLFLSITTTAVNAAPQIHGREIIIPAEDIQPFVSNHFPQTKTLLGGLIELSTSQPRIAIPPGHRMTLSFDL AISSGGGQPSPLGRVGLSSAMYYDTARQAFFLDQPTLEHFKPAHSGIELDEQIREFINTWLQDYARREPVYQLSPALTAM LGNVHLQSSTITNGHFSLTFDRDISPLIPDN >Mature_191_residues MHRHTLLGLLLFLSITTTAVNAAPQIHGREIIIPAEDIQPFVSNHFPQTKTLLGGLIELSTSQPRIAIPPGHRMTLSFDL AISSGGGQPSPLGRVGLSSAMYYDTARQAFFLDQPTLEHFKPAHSGIELDEQIREFINTWLQDYARREPVYQLSPALTAM LGNVHLQSSTITNGHFSLTFDRDISPLIPDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21123; Mature: 21123
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRHTLLGLLLFLSITTTAVNAAPQIHGREIIIPAEDIQPFVSNHFPQTKTLLGGLIELS CCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHEEC TSQPRIAIPPGHRMTLSFDLAISSGGGQPSPLGRVGLSSAMYYDTARQAFFLDQPTLEHF CCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCHHHC KPAHSGIELDEQIREFINTWLQDYARREPVYQLSPALTAMLGNVHLQSSTITNGHFSLTF CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEECCEECCCEEEEEE DRDISPLIPDN CCCCCCCCCCC >Mature Secondary Structure MHRHTLLGLLLFLSITTTAVNAAPQIHGREIIIPAEDIQPFVSNHFPQTKTLLGGLIELS CCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHEEC TSQPRIAIPPGHRMTLSFDLAISSGGGQPSPLGRVGLSSAMYYDTARQAFFLDQPTLEHF CCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCHHHC KPAHSGIELDEQIREFINTWLQDYARREPVYQLSPALTAMLGNVHLQSSTITNGHFSLTF CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEECCEECCCEEEEEE DRDISPLIPDN CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA