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The map label for this gene is hctB [H]

Identifier: 62185027

GI number: 62185027

Start: 457044

End: 457508

Strand: Direct

Name: hctB [H]

Synonym: CAB398

Alternate gene names: 62185027

Gene position: 457044-457508 (Clockwise)

Preceding gene: 62185026

Following gene: 62185028

Centisome position: 39.94

GC content: 47.1

Gene sequence:

>465_bases
ATGTTAGGAGTACAAAAAAAACGTAGCAGCAAGAAAACAGCGACTAAAGCTGTTCGTAAACCTGCTAGGAAGGCTACTGC
TAAGAAGACGGCGACGAGAAAGCCTGCAGTTAAAAAGGCAGTTCGCAAGACAGCTGCGAAAAAAGCTACTGTGCGTAAGA
CTGTTAGCAAAATGACAGTACGCAAGACTGTAGCGAAAAAAGCTACTGCTAAGAAGACGGCGACAAGAAAGCCTGCGGCG
AGAAAGACGGTCCGTAAGACAGCTGCGAAAACAGCGGCTACTCGCAAGCCTGCCGCTAGAAAAGCCGTAGCAAAACCTGC
TATGTCATGCCATAAGCATCACAAACACACAGCTTCTTGCCAACGTGTATGCGCTTCTTCAGCAAAAAGACGCTGTGGTT
CTAAAAGCCGTGTTCGTACAGCTCATGGCTGGCGTCAACAATTAATGAAACTTGTTTCTCGATAG

Upstream 100 bases:

>100_bases
TTTTAATTTATTAAAATAAATGCGCGTTTTATTAAAGTTTTTTCAATTTCCTGCCGATAAATGGGGTAAGTAATTACCTG
TCTAATTAGGGGAAATGAAA

Downstream 100 bases:

>100_bases
GAACTAATTTCATTAGGCGATGGTGAACGGTAAGAGGATATAAAAAAAAGATCTCTTACCGTTTTTTTTGTTGATACCGA
GGATTCTATCGACTCTCTCT

Product: histone-like protein

Products: NA

Alternate protein names: HC2 nucleoprotein [H]

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MLGVQKKRSSKKTATKAVRKPARKATAKKTATRKPAVKKAVRKTAAKKATVRKTVSKMTVRKTVAKKATAKKTATRKPAA
RKTVRKTAAKTAATRKPAARKAVAKPAMSCHKHHKHTASCQRVCASSAKRRCGSKSRVRTAHGWRQQLMKLVSR

Sequences:

>Translated_154_residues
MLGVQKKRSSKKTATKAVRKPARKATAKKTATRKPAVKKAVRKTAAKKATVRKTVSKMTVRKTVAKKATAKKTATRKPAA
RKTVRKTAAKTAATRKPAARKAVAKPAMSCHKHHKHTASCQRVCASSAKRRCGSKSRVRTAHGWRQQLMKLVSR
>Mature_154_residues
MLGVQKKRSSKKTATKAVRKPARKATAKKTATRKPAVKKAVRKTAAKKATVRKTVSKMTVRKTVAKKATAKKTATRKPAA
RKTVRKTAAKTAATRKPAARKAVAKPAMSCHKHHKHTASCQRVCASSAKRRCGSKSRVRTAHGWRQQLMKLVSR

Specific function: Might have a role in establishing the nucleoid structure of elementary bodies [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the histone H1/H5 family. HCT subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009970 [H]

Pfam domain/function: PF07382 HC2 [H]

EC number: NA

Molecular weight: Translated: 16874; Mature: 16874

Theoretical pI: Translated: 12.97; Mature: 12.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGVQKKRSSKKTATKAVRKPARKATAKKTATRKPAVKKAVRKTAAKKATVRKTVSKMTV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RKTVAKKATAKKTATRKPAARKTVRKTAAKTAATRKPAARKAVAKPAMSCHKHHKHTASC
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
QRVCASSAKRRCGSKSRVRTAHGWRQQLMKLVSR
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLGVQKKRSSKKTATKAVRKPARKATAKKTATRKPAVKKAVRKTAAKKATVRKTVSKMTV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RKTVAKKATAKKTATRKPAARKTVRKTAAKTAATRKPAARKAVAKPAMSCHKHHKHTASC
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
QRVCASSAKRRCGSKSRVRTAHGWRQQLMKLVSR
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]