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The map label for this gene is 62185028

Identifier: 62185028

GI number: 62185028

Start: 457674

End: 458609

Strand: Direct

Name: 62185028

Synonym: CAB399

Alternate gene names: NA

Gene position: 457674-458609 (Clockwise)

Preceding gene: 62185027

Following gene: 62185029

Centisome position: 39.99

GC content: 41.56

Gene sequence:

>936_bases
ATGCAAGATTACACTTGCTTCCAAGATTTTTCCAAATTTTACAAGGAAAAGGCTCCACACCTCACAGTCATTGGCTCAAA
TTCTGAAGAAGATCGGCGAGTGTGTGTAGAGTTGCTTGTTTCTGGGAAAGCTCAGGAAATGGATGCTTTGGGATTAACAA
TCAGCGACTTATCACAATGGACGGAGTCTTATGGTTTATTTGCCTCTAGAGAAGTCGTTTCTATTTTCCAAGCGGAGAAG
CTCTCCTCGCAAACGCGTGATTTTCTAGCTCGCTATGCTAGAAATCCTCATCCTCATCTCACTTTAATATTATTCACGAC
GAAGCAGTCGTTTTTCCAGTCTTTGCGGAAGGAGCTCCCTTCTGCAGTGTTCTTATCGTTATTTGGTGAATGGCAGTCGG
ATGCGGAGAAACGTATGGCGATCCTCCTATCTCAAAAAGCTTCTCTGTTAGGGATTTCCTGTTCTTTAGCCTTGGCTTCA
GCATTTATTAAGAAATTTCCTCAAGCGGAAATGCATAATCTTCTTGGGGAGTTTCATAAGTTGCTTTGCTGTTTAGGGAA
AAAGCAAGTTCTAGAGTACAACGATATTGAAAACTTTGTTGTGAAACAAGAGCAGGTATCTCTATGGAAATTACGCGATG
CTGTATTTCAAAGGAATACGTCTGCGAGTCAGGCAATGCTTCAAGCTTTGCTGCATGAACATGGCGAAGAACCTTTGGGA
TTAATAGCGTTTCTTCGTGGGCAGTGTTTGTACGGCTTGCGTAGTTTGGAAGAAGCCGCGGGGGATAGGAAACACCGCTT
TTTTGTTGCCTATGGGAAAGAACGGCTCTATCAAGCCTTGAGTTATTTATTTTATGCTGAGAGTATAATTAAGAATAATG
CTCAAGATTCTATAATTGCTATGGAAACTTTGCTGATTAGGATGACAAGTATATGA

Upstream 100 bases:

>100_bases
TTTTGTTGATACCGAGGATTCTATCGACTCTCTCTGTACAGTTAGATGCGTAAAGGGTATAGTAAGTCCCTACCCTTATC
TGTGCTAGGAGGTTTAGGAG

Downstream 100 bases:

>100_bases
CTTTATATATTTTCCCCAACACTTTAGGAAATCGACGCGTGGATCTTTTACCCGCGGGTATAGGTGAAGTTATACCTAAG
CTCCACGGTTTAATTGCCGA

Product: hypothetical protein

Products: diphosphate; DNAn+1

Alternate protein names: None

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MQDYTCFQDFSKFYKEKAPHLTVIGSNSEEDRRVCVELLVSGKAQEMDALGLTISDLSQWTESYGLFASREVVSIFQAEK
LSSQTRDFLARYARNPHPHLTLILFTTKQSFFQSLRKELPSAVFLSLFGEWQSDAEKRMAILLSQKASLLGISCSLALAS
AFIKKFPQAEMHNLLGEFHKLLCCLGKKQVLEYNDIENFVVKQEQVSLWKLRDAVFQRNTSASQAMLQALLHEHGEEPLG
LIAFLRGQCLYGLRSLEEAAGDRKHRFFVAYGKERLYQALSYLFYAESIIKNNAQDSIIAMETLLIRMTSI

Sequences:

>Translated_311_residues
MQDYTCFQDFSKFYKEKAPHLTVIGSNSEEDRRVCVELLVSGKAQEMDALGLTISDLSQWTESYGLFASREVVSIFQAEK
LSSQTRDFLARYARNPHPHLTLILFTTKQSFFQSLRKELPSAVFLSLFGEWQSDAEKRMAILLSQKASLLGISCSLALAS
AFIKKFPQAEMHNLLGEFHKLLCCLGKKQVLEYNDIENFVVKQEQVSLWKLRDAVFQRNTSASQAMLQALLHEHGEEPLG
LIAFLRGQCLYGLRSLEEAAGDRKHRFFVAYGKERLYQALSYLFYAESIIKNNAQDSIIAMETLLIRMTSI
>Mature_311_residues
MQDYTCFQDFSKFYKEKAPHLTVIGSNSEEDRRVCVELLVSGKAQEMDALGLTISDLSQWTESYGLFASREVVSIFQAEK
LSSQTRDFLARYARNPHPHLTLILFTTKQSFFQSLRKELPSAVFLSLFGEWQSDAEKRMAILLSQKASLLGISCSLALAS
AFIKKFPQAEMHNLLGEFHKLLCCLGKKQVLEYNDIENFVVKQEQVSLWKLRDAVFQRNTSASQAMLQALLHEHGEEPLG
LIAFLRGQCLYGLRSLEEAAGDRKHRFFVAYGKERLYQALSYLFYAESIIKNNAQDSIIAMETLLIRMTSI

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 35464; Mature: 35464

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDYTCFQDFSKFYKEKAPHLTVIGSNSEEDRRVCVELLVSGKAQEMDALGLTISDLSQW
CCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHH
TESYGLFASREVVSIFQAEKLSSQTRDFLARYARNPHPHLTLILFTTKQSFFQSLRKELP
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCC
SAVFLSLFGEWQSDAEKRMAILLSQKASLLGISCSLALASAFIKKFPQAEMHNLLGEFHK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LLCCLGKKQVLEYNDIENFVVKQEQVSLWKLRDAVFQRNTSASQAMLQALLHEHGEEPLG
HHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHH
LIAFLRGQCLYGLRSLEEAAGDRKHRFFVAYGKERLYQALSYLFYAESIIKNNAQDSIIA
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHH
METLLIRMTSI
HHHHHHHHHCC
>Mature Secondary Structure
MQDYTCFQDFSKFYKEKAPHLTVIGSNSEEDRRVCVELLVSGKAQEMDALGLTISDLSQW
CCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHH
TESYGLFASREVVSIFQAEKLSSQTRDFLARYARNPHPHLTLILFTTKQSFFQSLRKELP
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCC
SAVFLSLFGEWQSDAEKRMAILLSQKASLLGISCSLALASAFIKKFPQAEMHNLLGEFHK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LLCCLGKKQVLEYNDIENFVVKQEQVSLWKLRDAVFQRNTSASQAMLQALLHEHGEEPLG
HHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHH
LIAFLRGQCLYGLRSLEEAAGDRKHRFFVAYGKERLYQALSYLFYAESIIKNNAQDSIIA
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHH
METLLIRMTSI
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA