| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62184680
Identifier: 62184680
GI number: 62184680
Start: 42611
End: 42865
Strand: Direct
Name: 62184680
Synonym: CAB033
Alternate gene names: NA
Gene position: 42611-42865 (Clockwise)
Preceding gene: 62184679
Following gene: 62184681
Centisome position: 3.72
GC content: 38.43
Gene sequence:
>255_bases ATGAGTAGTGGTAGCAGTTGCTCAGCTTTTAATTTTAATGACATGCTTAATGGCGTATGTAAATACGTCCAAGGTGTGCA ACAATATCTAACGGAATTAGAAACCTCAACGCAAGGTACAGTCGACTTGGGTACGATGTTTAATTTGCAATTCCGTATGC AAATTTTATCACAGTATATGGAAGCTGTATCCAACATCTTGACAGCAGTGAACACAGAGATGATCACTATGGCAAGAGCT GTTAAAGGAAGTTAA
Upstream 100 bases:
>100_bases GAAGCAACAAATAGTATTAGCAGGATATCTAGCCCTTCAGAAAGTTCTCGGGCGGATCAACCGCAAAAATGGTTTAACAG ACTAGATAAGTGGAGAATTT
Downstream 100 bases:
>100_bases TAAATTAAGAGAAGGATCATGGCAGATTTGGAATTATTTAAAGCAGATTTTGCGTTGTTGTTTGAAGCGGGCATGTTGGC CATTAAACAAGGCGACGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSSGSSCSAFNFNDMLNGVCKYVQGVQQYLTELETSTQGTVDLGTMFNLQFRMQILSQYMEAVSNILTAVNTEMITMARA VKGS
Sequences:
>Translated_84_residues MSSGSSCSAFNFNDMLNGVCKYVQGVQQYLTELETSTQGTVDLGTMFNLQFRMQILSQYMEAVSNILTAVNTEMITMARA VKGS >Mature_83_residues SSGSSCSAFNFNDMLNGVCKYVQGVQQYLTELETSTQGTVDLGTMFNLQFRMQILSQYMEAVSNILTAVNTEMITMARAV KGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_0710/CT_666/TC_0037 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9234; Mature: 9103
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 8.3 %Met (Translated Protein) 10.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 7.2 %Met (Mature Protein) 9.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGSSCSAFNFNDMLNGVCKYVQGVQQYLTELETSTQGTVDLGTMFNLQFRMQILSQYM CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHH EAVSNILTAVNTEMITMARAVKGS HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSGSSCSAFNFNDMLNGVCKYVQGVQQYLTELETSTQGTVDLGTMFNLQFRMQILSQYM CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHH EAVSNILTAVNTEMITMARAVKGS HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9784136 [H]