| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62184681
Identifier: 62184681
GI number: 62184681
Start: 42884
End: 43333
Strand: Direct
Name: 62184681
Synonym: CAB034
Alternate gene names: NA
Gene position: 42884-43333 (Clockwise)
Preceding gene: 62184680
Following gene: 62184682
Centisome position: 3.75
GC content: 36.89
Gene sequence:
>450_bases ATGGCAGATTTGGAATTATTTAAAGCAGATTTTGCGTTGTTGTTTGAAGCGGGCATGTTGGCCATTAAACAAGGCGACGA AGAAAGTGCAAAAAAGCTTTTTCAATCTCTACAAATCTTAAATCCTGACCATTATGGTTATGAATTAGGATTAGCATTGA TAGACCTGCATAAAATGGAAATTTTCGCTGCAGAAGAACGATTAAATGCTTTAGCACAAAAAGAAGTGGATAATTGGAGC ATTAAGTCTTTCCTGTCTCTAACACATATGATGATCGTATTGCATCAAGGAAGCTCTTTCGAAGTGCGTCGTGAAAGCTT AGAAAATTGCTTAAAATTGGCAGGTCAAGTGTTGGAAAATTGTGAAGTCGAATCCACAAGAATTCTAGCACAATCTGTTT TAGACTGGCATGATAGCTTAGTAGCTAAAAGCGGAGGACCTTTAAGTTAA
Upstream 100 bases:
>100_bases GTATATGGAAGCTGTATCCAACATCTTGACAGCAGTGAACACAGAGATGATCACTATGGCAAGAGCTGTTAAAGGAAGTT AATAAATTAAGAGAAGGATC
Downstream 100 bases:
>100_bases CCTTATTCCGTCCTAAATATAAAAAAACGCCCGGTTGTTGTCTTATGATAGATCCTTTGAAGCTTTTCCCAAAGCTAGAC TCCGAGAAAGAAACAGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MADLELFKADFALLFEAGMLAIKQGDEESAKKLFQSLQILNPDHYGYELGLALIDLHKMEIFAAEERLNALAQKEVDNWS IKSFLSLTHMMIVLHQGSSFEVRRESLENCLKLAGQVLENCEVESTRILAQSVLDWHDSLVAKSGGPLS
Sequences:
>Translated_149_residues MADLELFKADFALLFEAGMLAIKQGDEESAKKLFQSLQILNPDHYGYELGLALIDLHKMEIFAAEERLNALAQKEVDNWS IKSFLSLTHMMIVLHQGSSFEVRRESLENCLKLAGQVLENCEVESTRILAQSVLDWHDSLVAKSGGPLS >Mature_148_residues ADLELFKADFALLFEAGMLAIKQGDEESAKKLFQSLQILNPDHYGYELGLALIDLHKMEIFAAEERLNALAQKEVDNWSI KSFLSLTHMMIVLHQGSSFEVRRESLENCLKLAGQVLENCEVESTRILAQSVLDWHDSLVAKSGGPLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16693; Mature: 16562
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLELFKADFALLFEAGMLAIKQGDEESAKKLFQSLQILNPDHYGYELGLALIDLHKME CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH IFAAEERLNALAQKEVDNWSIKSFLSLTHMMIVLHQGSSFEVRRESLENCLKLAGQVLEN HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC CEVESTRILAQSVLDWHDSLVAKSGGPLS CCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ADLELFKADFALLFEAGMLAIKQGDEESAKKLFQSLQILNPDHYGYELGLALIDLHKME CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH IFAAEERLNALAQKEVDNWSIKSFLSLTHMMIVLHQGSSFEVRRESLENCLKLAGQVLEN HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC CEVESTRILAQSVLDWHDSLVAKSGGPLS CCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA