| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
Click here to switch to the map view.
The map label for this gene is 62184679
Identifier: 62184679
GI number: 62184679
Start: 42314
End: 42595
Strand: Direct
Name: 62184679
Synonym: CAB032
Alternate gene names: NA
Gene position: 42314-42595 (Clockwise)
Preceding gene: 62184678
Following gene: 62184680
Centisome position: 3.7
GC content: 36.17
Gene sequence:
>282_bases TTGTATTTAGGAAGAAATACTATGTTTAATATGGAAAATACAGCTGCTAAAGAAGATAGATTTTCTCATCAGCTATTTGA TTTAGAGAAAGATATGCAGGATCTGAGCAAAGCTCAGGAGATCAAAGCTAATGTACAGGATAAAGTGCAAAAATTGCATG TTTCTCTTCGAGAAGGTTCTGATAAAGCCTCTTTTGAGAAGCAACAAATAGTATTAGCAGGATATCTAGCCCTTCAGAAA GTTCTCGGGCGGATCAACCGCAAAAATGGTTTAACAGACTAG
Upstream 100 bases:
>100_bases GTCACAAGCATACAACCACACTGTATCTTTTTAGAGAAGGAAGGGTTGAAATATAAAATCGAGTACAATAAATAGCTAAT GTTAAGGCTTATTAATTCTG
Downstream 100 bases:
>100_bases ATAAGTGGAGAATTTATGAGTAGTGGTAGCAGTTGCTCAGCTTTTAATTTTAATGACATGCTTAATGGCGTATGTAAATA CGTCCAAGGTGTGCAACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MYLGRNTMFNMENTAAKEDRFSHQLFDLEKDMQDLSKAQEIKANVQDKVQKLHVSLREGSDKASFEKQQIVLAGYLALQK VLGRINRKNGLTD
Sequences:
>Translated_93_residues MYLGRNTMFNMENTAAKEDRFSHQLFDLEKDMQDLSKAQEIKANVQDKVQKLHVSLREGSDKASFEKQQIVLAGYLALQK VLGRINRKNGLTD >Mature_93_residues MYLGRNTMFNMENTAAKEDRFSHQLFDLEKDMQDLSKAQEIKANVQDKVQKLHVSLREGSDKASFEKQQIVLAGYLALQK VLGRINRKNGLTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_0711/CT_665/TC_0036 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10686; Mature: 10686
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLGRNTMFNMENTAAKEDRFSHQLFDLEKDMQDLSKAQEIKANVQDKVQKLHVSLREGS CCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DKASFEKQQIVLAGYLALQKVLGRINRKNGLTD CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MYLGRNTMFNMENTAAKEDRFSHQLFDLEKDMQDLSKAQEIKANVQDKVQKLHVSLREGS CCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DKASFEKQQIVLAGYLALQKVLGRINRKNGLTD CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9784136 [H]