Click here to switch to the map view.

The map label for this gene is 28572955

Identifier: 28572955

GI number: 28572955

Start: 923696

End: 924196

Strand: Reverse

Name: 28572955

Synonym: TW814

Alternate gene names: NA

Gene position: 924196-923696 (Counterclockwise)

Preceding gene: 28572956

Following gene: 28572954

Centisome position: 99.81

GC content: 48.9

Gene sequence:

>501_bases
ATGACAGAAGGATTAACAAACGGCCTTGATAGCGAATCAAACATGGGGTCCGATGCAGACCGCGTTGCAAATCTCGCCGC
TGATTATCTTGAGGGGTTCTTGGATATATGTGATCTAGATGGAGATATAAAAGTTTCTCTATCAGAAGACAGAATCTCTA
TATCCGTTAATGATGATACCGACGCGCTTGCCCCGCTCAGCGATCCGGTGGTTGTAAAAGCCTTACGTGATCTAATGGCC
TTACACGTGCGAACGCGCGCGCAACATGCGTGCAAGGTTGCTTTGTCAATCGGCAGATCTTCTCAGATAAAAGAGGAGGC
GCTGCGCAATATGGTCTTGGCGGGTATTGCCAAGATTAAAGCGGGGGTGTGGGCGGTTCACATGCCGCATATGTGCAGTT
ATGACCGAAGAATTGTTCACAGGATAGCTGCGGATATGGGCTGTGCCTCTAAGTCACAGGGTGTTGGGCCTAGCAGACAT
GTTGTGTTATCAAACCCTTGA

Upstream 100 bases:

>100_bases
TTTGAGTTGAGACGCAAGAGACTTGGTGTTCAAAACAAAAAAACAAAAGGTCAGAGGCAGCAACCGGTAAACAAAAGACG
TGCAAAGAGAAGGTGATTGT

Downstream 100 bases:

>100_bases
CCGGCTTTTCTGTGCGGTCAACGATTGTGCCGTAGACCGGGGGTGCCTTTGGGGTTTTAGTGGCGGAACCGTCAATTATT
AGGCTTTATATATCCGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Jag-Like Protein; Jag Protein; R3H Domain Protein; R2H Domain-Containing Protein

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MTEGLTNGLDSESNMGSDADRVANLAADYLEGFLDICDLDGDIKVSLSEDRISISVNDDTDALAPLSDPVVVKALRDLMA
LHVRTRAQHACKVALSIGRSSQIKEEALRNMVLAGIAKIKAGVWAVHMPHMCSYDRRIVHRIAADMGCASKSQGVGPSRH
VVLSNP

Sequences:

>Translated_166_residues
MTEGLTNGLDSESNMGSDADRVANLAADYLEGFLDICDLDGDIKVSLSEDRISISVNDDTDALAPLSDPVVVKALRDLMA
LHVRTRAQHACKVALSIGRSSQIKEEALRNMVLAGIAKIKAGVWAVHMPHMCSYDRRIVHRIAADMGCASKSQGVGPSRH
VVLSNP
>Mature_165_residues
TEGLTNGLDSESNMGSDADRVANLAADYLEGFLDICDLDGDIKVSLSEDRISISVNDDTDALAPLSDPVVVKALRDLMAL
HVRTRAQHACKVALSIGRSSQIKEEALRNMVLAGIAKIKAGVWAVHMPHMCSYDRRIVHRIAADMGCASKSQGVGPSRHV
VLSNP

Specific function: Unknown

COG id: COG1847

COG function: function code R; Predicted RNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17823; Mature: 17691

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS51061 R3H

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEGLTNGLDSESNMGSDADRVANLAADYLEGFLDICDLDGDIKVSLSEDRISISVNDDT
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCC
DALAPLSDPVVVKALRDLMALHVRTRAQHACKVALSIGRSSQIKEEALRNMVLAGIAKIK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AGVWAVHMPHMCSYDRRIVHRIAADMGCASKSQGVGPSRHVVLSNP
HCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCC
>Mature Secondary Structure 
TEGLTNGLDSESNMGSDADRVANLAADYLEGFLDICDLDGDIKVSLSEDRISISVNDDT
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCC
DALAPLSDPVVVKALRDLMALHVRTRAQHACKVALSIGRSSQIKEEALRNMVLAGIAKIK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AGVWAVHMPHMCSYDRRIVHRIAADMGCASKSQGVGPSRHVVLSNP
HCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA