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The map label for this gene is oxaA

Identifier: 28572956

GI number: 28572956

Start: 924201

End: 925133

Strand: Reverse

Name: oxaA

Synonym: TW815

Alternate gene names: 28572956

Gene position: 925133-924201 (Counterclockwise)

Preceding gene: 28572957

Following gene: 28572955

Centisome position: 99.91

GC content: 43.3

Gene sequence:

>933_bases
ATGTTTGACGGACTGTTTGATTTTCTGCAGAATATATTGCTTCCCATAAAGTGGGTTATAGAGCAAATTCTAGTTTTTTT
TCACACCCTGCTTGGCTTTCTTGGGTTTGGCGACAAATCTGGGCTTTCTTGGGCGCTTTCCATTGTTGGCTTGGTTATTG
TTATTCGCGCTACATTAATTCCGGTTTTTCTAAAACAAATTAGAGCACAACGAAAAATGTTGGAAATTGCCCCTGAAGTA
AGGAGGATCCAAGAGAAATACAAAGGCAAGAGGGATGTGTTATCAAGGCAGTCCATGAACCAGGAAATGATGGAAATTTA
CAGAGTAAGGGGCGCAAACCCGCTTTCATCCTGTCTTCCAATTGTGTTGCAAATGCCAGTATTCTTCGGTTTGTATCAAG
TTATTGAGTCTGCCCAAAATGCCGGTACAGGGGTTGGGCCACTCAATGGCCCCTTGGGTATGGATTTCAGGGACTCGCGC
ATTTTTGGTGTTGTTCCTCTTCATGATTCTTTTTCGCATGACTTTTATGCGCTGCAAGCCGGTCAGGCTTTTAATCTCAT
AACAATGATTGTCGCGGGTGTTCTAACGGCTATTATGATCGCAGTTCAGCTCTTTACCCAATTAAAGGTGATCCCGAAAA
ACATTCCCGAAAACGCTAAGAATACCTCTGTATACAAAAACCAGAAGGTGATGCTTTATCTTTTACCGATTATGTTTCTT
GGCATGGGTTTTTCGTTTCCTGTGGGAATATTGATCTATTGGACGGCCTCTAATGTTTGGTCTGGCGTTCAGCAGGCTGT
TGCTATTTATCGGAACCCATCCCCCGGGAGCCTGGCTTTTGAGTTGAGACGCAAGAGACTTGGTGTTCAAAACAAAAAAA
CAAAAGGTCAGAGGCAGCAACCGGTAAACAAAAGACGTGCAAAGAGAAGGTGA

Upstream 100 bases:

>100_bases
AGGCTCGTAAGGTGTAACCCGTGGTCGAAGGGTGGCGTTGATATGCCAAGGGTTAGTACGAAATACCGCGTTAATAAGTT
TGGGTTCGCGTCTAGAAAAA

Downstream 100 bases:

>100_bases
TTGTATGACAGAAGGATTAACAAACGGCCTTGATAGCGAATCAAACATGGGGTCCGATGCAGACCGCGTTGCAAATCTCG
CCGCTGATTATCTTGAGGGG

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MFDGLFDFLQNILLPIKWVIEQILVFFHTLLGFLGFGDKSGLSWALSIVGLVIVIRATLIPVFLKQIRAQRKMLEIAPEV
RRIQEKYKGKRDVLSRQSMNQEMMEIYRVRGANPLSSCLPIVLQMPVFFGLYQVIESAQNAGTGVGPLNGPLGMDFRDSR
IFGVVPLHDSFSHDFYALQAGQAFNLITMIVAGVLTAIMIAVQLFTQLKVIPKNIPENAKNTSVYKNQKVMLYLLPIMFL
GMGFSFPVGILIYWTASNVWSGVQQAVAIYRNPSPGSLAFELRRKRLGVQNKKTKGQRQQPVNKRRAKRR

Sequences:

>Translated_310_residues
MFDGLFDFLQNILLPIKWVIEQILVFFHTLLGFLGFGDKSGLSWALSIVGLVIVIRATLIPVFLKQIRAQRKMLEIAPEV
RRIQEKYKGKRDVLSRQSMNQEMMEIYRVRGANPLSSCLPIVLQMPVFFGLYQVIESAQNAGTGVGPLNGPLGMDFRDSR
IFGVVPLHDSFSHDFYALQAGQAFNLITMIVAGVLTAIMIAVQLFTQLKVIPKNIPENAKNTSVYKNQKVMLYLLPIMFL
GMGFSFPVGILIYWTASNVWSGVQQAVAIYRNPSPGSLAFELRRKRLGVQNKKTKGQRQQPVNKRRAKRR
>Mature_310_residues
MFDGLFDFLQNILLPIKWVIEQILVFFHTLLGFLGFGDKSGLSWALSIVGLVIVIRATLIPVFLKQIRAQRKMLEIAPEV
RRIQEKYKGKRDVLSRQSMNQEMMEIYRVRGANPLSSCLPIVLQMPVFFGLYQVIESAQNAGTGVGPLNGPLGMDFRDSR
IFGVVPLHDSFSHDFYALQAGQAFNLITMIVAGVLTAIMIAVQLFTQLKVIPKNIPENAKNTSVYKNQKVMLYLLPIMFL
GMGFSFPVGILIYWTASNVWSGVQQAVAIYRNPSPGSLAFELRRKRLGVQNKKTKGQRQQPVNKRRAKRR

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily

Homologues:

Organism=Escherichia coli, GI1790140, Length=258, Percent_Identity=22.8682170542636, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OXAA_TROW8 (Q83N53)

Other databases:

- EMBL:   BX251412
- RefSeq:   NP_789736.1
- STRING:   Q83N53
- GeneID:   1065015
- GenomeReviews:   BX072543_GR
- KEGG:   tws:TW815
- eggNOG:   COG0706
- HOGENOM:   HBG560622
- OMA:   AVEKNIA
- ProtClustDB:   PRK01315
- BioCyc:   TWHI218496:TW0781-MONOMER
- HAMAP:   MF_01810
- InterPro:   IPR001708
- PANTHER:   PTHR12428
- TIGRFAMs:   TIGR03592

Pfam domain/function: PF02096 60KD_IMP

EC number: NA

Molecular weight: Translated: 35033; Mature: 35033

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc2d0bd8)-; HASH(0xc7d44f0)-; HASH(0xcea72e0)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDGLFDFLQNILLPIKWVIEQILVFFHTLLGFLGFGDKSGLSWALSIVGLVIVIRATLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
PVFLKQIRAQRKMLEIAPEVRRIQEKYKGKRDVLSRQSMNQEMMEIYRVRGANPLSSCLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
IVLQMPVFFGLYQVIESAQNAGTGVGPLNGPLGMDFRDSRIFGVVPLHDSFSHDFYALQA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEC
GQAFNLITMIVAGVLTAIMIAVQLFTQLKVIPKNIPENAKNTSVYKNQKVMLYLLPIMFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHH
GMGFSFPVGILIYWTASNVWSGVQQAVAIYRNPSPGSLAFELRRKRLGVQNKKTKGQRQQ
HCCCCCCHHHHEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
PVNKRRAKRR
CHHHHHCCCH
>Mature Secondary Structure
MFDGLFDFLQNILLPIKWVIEQILVFFHTLLGFLGFGDKSGLSWALSIVGLVIVIRATLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
PVFLKQIRAQRKMLEIAPEVRRIQEKYKGKRDVLSRQSMNQEMMEIYRVRGANPLSSCLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
IVLQMPVFFGLYQVIESAQNAGTGVGPLNGPLGMDFRDSRIFGVVPLHDSFSHDFYALQA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEC
GQAFNLITMIVAGVLTAIMIAVQLFTQLKVIPKNIPENAKNTSVYKNQKVMLYLLPIMFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHH
GMGFSFPVGILIYWTASNVWSGVQQAVAIYRNPSPGSLAFELRRKRLGVQNKKTKGQRQQ
HCCCCCCHHHHEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
PVNKRRAKRR
CHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12606174