| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is mutT1 [H]
Identifier: 28572824
GI number: 28572824
Start: 771236
End: 772135
Strand: Direct
Name: mutT1 [H]
Synonym: TW683
Alternate gene names: 28572824
Gene position: 771236-772135 (Clockwise)
Preceding gene: 28572823
Following gene: 28572825
Centisome position: 83.29
GC content: 45.67
Gene sequence:
>900_bases ATGAGCGAGGCGCAAAATGGATCAATCCCAAACGACAAGTGGGTGATACAAATTGCTGCTGGCACCATATGTTGGCGACA GCGAGATGATGCAGAAGTGGAAATTCTGACCATAAGTCGTCGCGGATACGGCGGCGTATCCTTTCCAAAAGGAAAGAGAG AGCCAGGCGAAAGTCTCCATTTGACAGCGTTTCGGGAAACTCTGGAAGAGACGAATGTAACAGTTAGGTTGGGGCAGTTT ATTGGGGAAAGCTCCTACTCATTTTTAGGTTCTGCAGACTATCCAAATAGAAGTGGTCACGCCATGAGGAATGCAAATAC CAGGCAGGGCAGAAAACAGCTAATCAAGAAACAGGTTCATTACTGGGCCGCAAAGCCAAGGGTTATAGAGAAATTTTTAT CAAATGACGAAGTTCAGAAAATACACTGGATAAAAGCTTCGGATATTAAAAGGGCTCAGCTACACAAGAGCGATATGGAA ATCGCAAATAAATTTCTTGATCTATACAAAAGAAGAGCAGAGCTGTTTCATGGAAAAACTGTTATTCTTCTGAGGCATGC ACACACACACGGAGAGGATGCTCTGTCACCGTTAGGCATGCAGCGTTCACAAACACTTCCCGTTGAACTATCGCCCTGGG CGCCGGAAAAAATATACTGCTCACCAAAACAGAGATGCATACAGACCGTCCATCCGCTATCCAAAACAGGAATAGATGTA CTCAACGATCCAGCACTTGGCGGTGAGAGCGGTGACAATATCTTGGAGAATATAAGGGAATATCCAGGGGAATGTATCTT GATCTGTACCCATGCGCCGCTTATAGCATCAACACTCAGCGCCTTAGGTGTTGAGCAAACAAATATCGCACCGGGAGAAT ACAGGGTTGTAACCCTGTAG
Upstream 100 bases:
>100_bases ATTTCGCAGAAGTTGAAAGAGACATTTTGTTCAATGTACGGGGAGGAAGATGAAGCAGAAGGTCTGTGAAGAATTCTCAC AAATAGTTAGGGTTGTGTAG
Downstream 100 bases:
>100_bases GGTCAGAGTGGGCCCGGTGGGGCTCGAACCCACGACCAGCGGATTAAAAGTCCGATGCTCTTCCAGCTGAGCTACAGGCC CCACGGAGAACCGAGATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: 7,8-dihydro-8-oxoguanine-triphosphatase; 8-oxo-dGTPase; dGTP pyrophosphohydrolase [H]
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MSEAQNGSIPNDKWVIQIAAGTICWRQRDDAEVEILTISRRGYGGVSFPKGKREPGESLHLTAFRETLEETNVTVRLGQF IGESSYSFLGSADYPNRSGHAMRNANTRQGRKQLIKKQVHYWAAKPRVIEKFLSNDEVQKIHWIKASDIKRAQLHKSDME IANKFLDLYKRRAELFHGKTVILLRHAHTHGEDALSPLGMQRSQTLPVELSPWAPEKIYCSPKQRCIQTVHPLSKTGIDV LNDPALGGESGDNILENIREYPGECILICTHAPLIASTLSALGVEQTNIAPGEYRVVTL
Sequences:
>Translated_299_residues MSEAQNGSIPNDKWVIQIAAGTICWRQRDDAEVEILTISRRGYGGVSFPKGKREPGESLHLTAFRETLEETNVTVRLGQF IGESSYSFLGSADYPNRSGHAMRNANTRQGRKQLIKKQVHYWAAKPRVIEKFLSNDEVQKIHWIKASDIKRAQLHKSDME IANKFLDLYKRRAELFHGKTVILLRHAHTHGEDALSPLGMQRSQTLPVELSPWAPEKIYCSPKQRCIQTVHPLSKTGIDV LNDPALGGESGDNILENIREYPGECILICTHAPLIASTLSALGVEQTNIAPGEYRVVTL >Mature_298_residues SEAQNGSIPNDKWVIQIAAGTICWRQRDDAEVEILTISRRGYGGVSFPKGKREPGESLHLTAFRETLEETNVTVRLGQFI GESSYSFLGSADYPNRSGHAMRNANTRQGRKQLIKKQVHYWAAKPRVIEKFLSNDEVQKIHWIKASDIKRAQLHKSDMEI ANKFLDLYKRRAELFHGKTVILLRHAHTHGEDALSPLGMQRSQTLPVELSPWAPEKIYCSPKQRCIQTVHPLSKTGIDVL NDPALGGESGDNILENIREYPGECILICTHAPLIASTLSALGVEQTNIAPGEYRVVTL
Specific function: May be involved in the GO system responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8- oxoguanine, 8-oxo-dGTP) from DNA and the nucleotide pool. 8-oxo- dGTP is inserted opposite dA and dC residues of template DNA with almost equa
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX; PF00300 PGAM [H]
EC number: NA
Molecular weight: Translated: 33517; Mature: 33385
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAQNGSIPNDKWVIQIAAGTICWRQRDDAEVEILTISRRGYGGVSFPKGKREPGESLH CCCCCCCCCCCCCEEEEEECCEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEE LTAFRETLEETNVTVRLGQFIGESSYSFLGSADYPNRSGHAMRNANTRQGRKQLIKKQVH HHHHHHHHHHCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH YWAAKPRVIEKFLSNDEVQKIHWIKASDIKRAQLHKSDMEIANKFLDLYKRRAELFHGKT HHCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE VILLRHAHTHGEDALSPLGMQRSQTLPVELSPWAPEKIYCSPKQRCIQTVHPLSKTGIDV EEEEEECCCCCCHHHCCCCCCCCCCCCEEECCCCCCCEEECHHHHHHHHHCCHHHCCCCC LNDPALGGESGDNILENIREYPGECILICTHAPLIASTLSALGVEQTNIAPGEYRVVTL CCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCEEEEEC >Mature Secondary Structure SEAQNGSIPNDKWVIQIAAGTICWRQRDDAEVEILTISRRGYGGVSFPKGKREPGESLH CCCCCCCCCCCCEEEEEECCEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEE LTAFRETLEETNVTVRLGQFIGESSYSFLGSADYPNRSGHAMRNANTRQGRKQLIKKQVH HHHHHHHHHHCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH YWAAKPRVIEKFLSNDEVQKIHWIKASDIKRAQLHKSDMEIANKFLDLYKRRAELFHGKT HHCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE VILLRHAHTHGEDALSPLGMQRSQTLPVELSPWAPEKIYCSPKQRCIQTVHPLSKTGIDV EEEEEECCCCCCHHHCCCCCCCCCCCCEEECCCCCCCEEECHHHHHHHHHCCHHHCCCCC LNDPALGGESGDNILENIREYPGECILICTHAPLIASTLSALGVEQTNIAPGEYRVVTL CCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]