| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is mshD [H]
Identifier: 28572823
GI number: 28572823
Start: 770211
End: 771188
Strand: Direct
Name: mshD [H]
Synonym: TW682
Alternate gene names: 28572823
Gene position: 770211-771188 (Clockwise)
Preceding gene: 28572817
Following gene: 28572824
Centisome position: 83.18
GC content: 44.38
Gene sequence:
>978_bases GTGCCATTCGACGAAAGTCGATTGCGGAAAGTTGCCGCTGTCTGCCAGCAATTTGACTCACACCCTCCTTTTTCTGACTA TACGCTTTTGGGCAAGCCAAGCGTATTATGTCTTATGTCTGACAAAACCCTGCATAACTCGACTGGAAGTGATTTTTTCT GTCCAAATCCCCTTGATATAGAGTGGCAAATTACATTAGGTATAGCCCTCGTAAACGGCAATGAGGCAGAAATGGTGATA ATTCCAGGGCACAGGAAAAACGGTTACGGGACATACTTCCTCAATGAAATACGTAAGCGTATCCCGGGCGATGTAAAATT CTGGGCACACGGAGCCCATCCAGCCGCGCTGGCCCTTGCAAAAAGATATGGGGCTACAGAGGAACGTGTTGTGTGCATAA TGCATCTCAAAAACCCCAGAGCGCGAGTAAAATCCTTGTTGCAATCCCTTAGTCGAATGCGGTGGATTGAATATGCAAAG CGAGTTTTGCAAAAAGTGGCGTTCTTATCACGCAGAGGAGCGGTAGAGTCAGTTACCTATAGGTGTTTTAGGACAGGTAG GGGCACGAAAGCAACTCGTGATGAGATTGAATGGCTAGCCCTCAATGCAGAAATTTTTAAAGATCATCCGGAGTATGGGA AGCTGACGATAAATGACCTCAGGCTTTGCTACTCGCAACCTTGGTTTAGCAGGAAAAGATTCATACTTGCGATAAAGAAT GGGAAGGTTGCGGGTTATGTTTGGATAAAACTCAATAAGCACAGCCGTAAAGGGGAAATTTACTCTCTGGGAAGCACCGG TGGTGGATTGGGTAGCAAATTATTGGAGCGAGCGCTTGACATAATGTACAGAAGGGGTGTTGAACTCATTTTTTTATATG TCGATGAGACAAACAAAAAAGCAATAAACCTCTATAGAAAATTTAATTTCGCAGAAGTTGAAAGAGACATTTTGTTCAAT GTACGGGGAGGAAGATGA
Upstream 100 bases:
>100_bases TCGCCTACCAGATGATTCTAATACGAGACTCTAAACACGGAACAATATCGAATACCATTGATGTTAAATGTCATTGTCTG AAAAACTGCTTGTCAGAGAG
Downstream 100 bases:
>100_bases AGCAGAAGGTCTGTGAAGAATTCTCACAAATAGTTAGGGTTGTGTAGATGAGCGAGGCGCAAAATGGATCAATCCCAAAC GACAAGTGGGTGATACAAAT
Product: acetyltransferase
Products: NA
Alternate protein names: MSH acetyltransferase; Mycothiol synthase [H]
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MPFDESRLRKVAAVCQQFDSHPPFSDYTLLGKPSVLCLMSDKTLHNSTGSDFFCPNPLDIEWQITLGIALVNGNEAEMVI IPGHRKNGYGTYFLNEIRKRIPGDVKFWAHGAHPAALALAKRYGATEERVVCIMHLKNPRARVKSLLQSLSRMRWIEYAK RVLQKVAFLSRRGAVESVTYRCFRTGRGTKATRDEIEWLALNAEIFKDHPEYGKLTINDLRLCYSQPWFSRKRFILAIKN GKVAGYVWIKLNKHSRKGEIYSLGSTGGGLGSKLLERALDIMYRRGVELIFLYVDETNKKAINLYRKFNFAEVERDILFN VRGGR
Sequences:
>Translated_325_residues MPFDESRLRKVAAVCQQFDSHPPFSDYTLLGKPSVLCLMSDKTLHNSTGSDFFCPNPLDIEWQITLGIALVNGNEAEMVI IPGHRKNGYGTYFLNEIRKRIPGDVKFWAHGAHPAALALAKRYGATEERVVCIMHLKNPRARVKSLLQSLSRMRWIEYAK RVLQKVAFLSRRGAVESVTYRCFRTGRGTKATRDEIEWLALNAEIFKDHPEYGKLTINDLRLCYSQPWFSRKRFILAIKN GKVAGYVWIKLNKHSRKGEIYSLGSTGGGLGSKLLERALDIMYRRGVELIFLYVDETNKKAINLYRKFNFAEVERDILFN VRGGR >Mature_324_residues PFDESRLRKVAAVCQQFDSHPPFSDYTLLGKPSVLCLMSDKTLHNSTGSDFFCPNPLDIEWQITLGIALVNGNEAEMVII PGHRKNGYGTYFLNEIRKRIPGDVKFWAHGAHPAALALAKRYGATEERVVCIMHLKNPRARVKSLLQSLSRMRWIEYAKR VLQKVAFLSRRGAVESVTYRCFRTGRGTKATRDEIEWLALNAEIFKDHPEYGKLTINDLRLCYSQPWFSRKRFILAIKNG KVAGYVWIKLNKHSRKGEIYSLGSTGGGLGSKLLERALDIMYRRGVELIFLYVDETNKKAINLYRKFNFAEVERDILFNV RGGR
Specific function: Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol [H]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 N-acetyltransferase domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR017813 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.189 [H]
Molecular weight: Translated: 37253; Mature: 37122
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFDESRLRKVAAVCQQFDSHPPFSDYTLLGKPSVLCLMSDKTLHNSTGSDFFCPNPLDI CCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCE EWQITLGIALVNGNEAEMVIIPGHRKNGYGTYFLNEIRKRIPGDVKFWAHGAHPAALALA EEEEEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHH KRYGATEERVVCIMHLKNPRARVKSLLQSLSRMRWIEYAKRVLQKVAFLSRRGAVESVTY HHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH RCFRTGRGTKATRDEIEWLALNAEIFKDHPEYGKLTINDLRLCYSQPWFSRKRFILAIKN HHHHCCCCCCCCHHCEEEEEECHHHHCCCCCCCCEEHHHHHHHHCCCCCCCCEEEEEEEC GKVAGYVWIKLNKHSRKGEIYSLGSTGGGLGSKLLERALDIMYRRGVELIFLYVDETNKK CCEEEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCH AINLYRKFNFAEVERDILFNVRGGR HHHHHHHCCHHHHCEEEEEEECCCC >Mature Secondary Structure PFDESRLRKVAAVCQQFDSHPPFSDYTLLGKPSVLCLMSDKTLHNSTGSDFFCPNPLDI CCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCE EWQITLGIALVNGNEAEMVIIPGHRKNGYGTYFLNEIRKRIPGDVKFWAHGAHPAALALA EEEEEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHH KRYGATEERVVCIMHLKNPRARVKSLLQSLSRMRWIEYAKRVLQKVAFLSRRGAVESVTY HHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH RCFRTGRGTKATRDEIEWLALNAEIFKDHPEYGKLTINDLRLCYSQPWFSRKRFILAIKN HHHHCCCCCCCCHHCEEEEEECHHHHCCCCCCCCEEHHHHHHHHCCCCCCCCEEEEEEEC GKVAGYVWIKLNKHSRKGEIYSLGSTGGGLGSKLLERALDIMYRRGVELIFLYVDETNKK CCEEEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCH AINLYRKFNFAEVERDILFNVRGGR HHHHHHHCCHHHHCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA