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The map label for this gene is 28572729

Identifier: 28572729

GI number: 28572729

Start: 646082

End: 646978

Strand: Reverse

Name: 28572729

Synonym: TW581

Alternate gene names: NA

Gene position: 646978-646082 (Counterclockwise)

Preceding gene: 28572730

Following gene: 28572728

Centisome position: 69.87

GC content: 43.48

Gene sequence:

>897_bases
ATGATTGGTCAAATTGCCCTTTCTGTTCTTTTTGCCGTAACTTTGGGGTGCGGGATTGCGAGCCTTACCTTTATGCTTTC
TCCGGTTAGCACATTTAGACGCCGTCTCACCCCTTATTTATCAAGGTTATCACAGGATATGTGTTTTTCCTTTAGAAGGC
CACTCTACCGTGAGCTCTTTGGGGTTTTTCGTATTTACTTGAACCGCTTCTACCGCACACAACCATCTGGCAAACTTGCT
GGACTCTTGGAAATCTCCAATCGGGATCAGTCAGTTGTCGATTTTCGTATCACTCAGATAGCAATTTCGGCACTGCTAAC
AGGTGTATTCTGGGTGCTTTTTTGCTTATTGCTATTTTCTGGTCAGGTAAATATTGTTTTTGGACTGTTAGCTCCCGCAG
TTTTTGCCGGTTCATTCTGGTGTATCGAGAACAATTTGCGCAGATATGTCAAAAAACGTAAGCAGAAAATACTCAATGAG
ATGCCATCAGCCTTTGAGTTCTTGAGTCTTTCCGTGTCTGCCGGAGAAGGTGTTCTTGATGCAATAAAGCGTATCTGTTT
TATTAGCAAGGGTGAATTCTCTATTGAGCTTAAGAAGGTATTAATTGGTGTTTCCAGTGGAGACACCCTGGAGCGATGTC
TCAAGCGTATGGCTGCAAAGCTTGACATTGTCAGCATCGATAGGGCGGTTAGTCAGATAATAACGGCAATCGAGCGTGGA
ACTCCACTTGCGGACATTCTGATAAAGCAGGCAAAAGAGGCGCGTAATGCAACCAGAGTTGCGCTTATTGAGCAAGCGGG
TAAAAAGGAGATCGCCATGATGTTTCCGCTTGTGTTCTTTATTTTGCCGGTAACAATTTTATTTGCAATATTTCCTGGGA
TACAGATTTTTCACTGA

Upstream 100 bases:

>100_bases
CAGGTGTTGTTGTTATTATTCTTGGCGCATTATCCTGCGCTATTGCCTACAAGATAATGATGGTTGTTGCGCGTATCCCA
CAGGAAGAGAGGTATATGGG

Downstream 100 bases:

>100_bases
TTGTTCTGATTCGGCTATTTATACACACGATATATTTTGATTCGATGTAAGAAAGGGGCAATATGAGCGTAATAAAAAAA
ACTATAAGAAATATTTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Type II Secretion System F Domain Protein; Flp Pilus Assembly Protein TadC; Flp Pilus Assembly Protein TadB; Pilus Assembly Protein; Type II Secretion System Protein F Domain Protein; Type II Secretion System F Domain-Containing Protein; Type II Secretion System Protein Subunit F; Type II Secretion System Protein F; Type II Secretion System F Domain

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MIGQIALSVLFAVTLGCGIASLTFMLSPVSTFRRRLTPYLSRLSQDMCFSFRRPLYRELFGVFRIYLNRFYRTQPSGKLA
GLLEISNRDQSVVDFRITQIAISALLTGVFWVLFCLLLFSGQVNIVFGLLAPAVFAGSFWCIENNLRRYVKKRKQKILNE
MPSAFEFLSLSVSAGEGVLDAIKRICFISKGEFSIELKKVLIGVSSGDTLERCLKRMAAKLDIVSIDRAVSQIITAIERG
TPLADILIKQAKEARNATRVALIEQAGKKEIAMMFPLVFFILPVTILFAIFPGIQIFH

Sequences:

>Translated_298_residues
MIGQIALSVLFAVTLGCGIASLTFMLSPVSTFRRRLTPYLSRLSQDMCFSFRRPLYRELFGVFRIYLNRFYRTQPSGKLA
GLLEISNRDQSVVDFRITQIAISALLTGVFWVLFCLLLFSGQVNIVFGLLAPAVFAGSFWCIENNLRRYVKKRKQKILNE
MPSAFEFLSLSVSAGEGVLDAIKRICFISKGEFSIELKKVLIGVSSGDTLERCLKRMAAKLDIVSIDRAVSQIITAIERG
TPLADILIKQAKEARNATRVALIEQAGKKEIAMMFPLVFFILPVTILFAIFPGIQIFH
>Mature_298_residues
MIGQIALSVLFAVTLGCGIASLTFMLSPVSTFRRRLTPYLSRLSQDMCFSFRRPLYRELFGVFRIYLNRFYRTQPSGKLA
GLLEISNRDQSVVDFRITQIAISALLTGVFWVLFCLLLFSGQVNIVFGLLAPAVFAGSFWCIENNLRRYVKKRKQKILNE
MPSAFEFLSLSVSAGEGVLDAIKRICFISKGEFSIELKKVLIGVSSGDTLERCLKRMAAKLDIVSIDRAVSQIITAIERG
TPLADILIKQAKEARNATRVALIEQAGKKEIAMMFPLVFFILPVTILFAIFPGIQIFH

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33423; Mature: 33423

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGQIALSVLFAVTLGCGIASLTFMLSPVSTFRRRLTPYLSRLSQDMCFSFRRPLYRELF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVFRIYLNRFYRTQPSGKLAGLLEISNRDQSVVDFRITQIAISALLTGVFWVLFCLLLFS
HHHHHHHHHHHHCCCCCCCEEHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GQVNIVFGLLAPAVFAGSFWCIENNLRRYVKKRKQKILNEMPSAFEFLSLSVSAGEGVLD
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHH
AIKRICFISKGEFSIELKKVLIGVSSGDTLERCLKRMAAKLDIVSIDRAVSQIITAIERG
HHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TPLADILIKQAKEARNATRVALIEQAGKKEIAMMFPLVFFILPVTILFAIFPGIQIFH
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIGQIALSVLFAVTLGCGIASLTFMLSPVSTFRRRLTPYLSRLSQDMCFSFRRPLYRELF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVFRIYLNRFYRTQPSGKLAGLLEISNRDQSVVDFRITQIAISALLTGVFWVLFCLLLFS
HHHHHHHHHHHHCCCCCCCEEHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GQVNIVFGLLAPAVFAGSFWCIENNLRRYVKKRKQKILNEMPSAFEFLSLSVSAGEGVLD
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHH
AIKRICFISKGEFSIELKKVLIGVSSGDTLERCLKRMAAKLDIVSIDRAVSQIITAIERG
HHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TPLADILIKQAKEARNATRVALIEQAGKKEIAMMFPLVFFILPVTILFAIFPGIQIFH
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA