Click here to switch to the map view.

The map label for this gene is 28572728

Identifier: 28572728

GI number: 28572728

Start: 645831

End: 646019

Strand: Reverse

Name: 28572728

Synonym: TW580

Alternate gene names: NA

Gene position: 646019-645831 (Counterclockwise)

Preceding gene: 28572729

Following gene: 28572727

Centisome position: 69.77

GC content: 41.8

Gene sequence:

>189_bases
ATGAGCGTAATAAAAAAAACTATAAGAAATATTTTTCATTCTGCACGTCAGGAGAGAGGGGATGTTCCGGGATGGGTCCT
AATAGCAGTTATGACAGTTGGTCTTGTCATGATGATATGGGCTATAGCCGGTCCGGCACTAACCCAGCTTTTCAACACTG
CTGTGCAGCATGTCAAAATTTTTAGATGA

Upstream 100 bases:

>100_bases
TATTTGCAATATTTCCTGGGATACAGATTTTTCACTGATTGTTCTGATTCGGCTATTTATACACACGATATATTTTGATT
CGATGTAAGAAAGGGGCAAT

Downstream 100 bases:

>100_bases
GCGCAGGCAACTTTCGAAGACGTATCACGAGTTTGCGTGACCCTGGAAGACACCACGAATCGGGCTCGGCGGTTGTAGAG
TTTGTTATGGTCGGCACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 61

Protein sequence:

>62_residues
MSVIKKTIRNIFHSARQERGDVPGWVLIAVMTVGLVMMIWAIAGPALTQLFNTAVQHVKIFR

Sequences:

>Translated_62_residues
MSVIKKTIRNIFHSARQERGDVPGWVLIAVMTVGLVMMIWAIAGPALTQLFNTAVQHVKIFR
>Mature_61_residues
SVIKKTIRNIFHSARQERGDVPGWVLIAVMTVGLVMMIWAIAGPALTQLFNTAVQHVKIFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6963; Mature: 6831

Theoretical pI: Translated: 12.10; Mature: 12.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVIKKTIRNIFHSARQERGDVPGWVLIAVMTVGLVMMIWAIAGPALTQLFNTAVQHVKI
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FR
CC
>Mature Secondary Structure 
SVIKKTIRNIFHSARQERGDVPGWVLIAVMTVGLVMMIWAIAGPALTQLFNTAVQHVKI
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA