Click here to switch to the map view.

The map label for this gene is 28572730

Identifier: 28572730

GI number: 28572730

Start: 646975

End: 647859

Strand: Reverse

Name: 28572730

Synonym: TW582

Alternate gene names: NA

Gene position: 647859-646975 (Counterclockwise)

Preceding gene: 28572731

Following gene: 28572729

Centisome position: 69.97

GC content: 44.41

Gene sequence:

>885_bases
ATGAACAGGGCTCCACTGTATTTAAGAACTTGGAGACTGATGCTTAGCGTGGCGCTTTCTTTGTTACTATCAGCAGGTAA
TCTATTTCTCCTTGCCAAATCAAAACCGTCAAGGCGGTACAGCAGATTCGATAAGTTTCATTCACGTCTTATCGCTGTCG
GATTACGGAATGTCTCACTTGGATCCTTTGTATCCCTGACAGTGCTATTCGGAGTTGTATTTGCCGCAATTATTACACTG
GTCACCGGAATATATATTTTTTGTGTATTTGGATTTTTAATCGGTATCGCTACACCGATATTAATTGTCAATTATCAATA
CCGAAGACTTGTCAGTCTTGATTCTAATATTTGGCCCGACATTGTCGAGAATGTAATCTCTGCTGTTCGGGTAGGCATGG
GACTTCCCGAGGCTTTATGCTCTCTATCCAGATTCGGACCGGTTAGGATAAGACAGATTTTTTGTAATCTTGAGAATGAA
TACGGTGCAACGGGAAATTTTGCATCTGCTGTTGCAAACGCAAAATGCGCACTTGCAGATCCAAAGGCAGATAGGATTCT
GGAAACCGTTCAACTTGCCAGAAGCCTTGGTGGCAGCGAGCTTATAAAGGTTCTTCGAAATTTATCAGAGTATATGCGCG
AAGACTTGGCAACTCGGGCAGAAATTGTCGGTCGACAATCTTGGGTCGTAAACGCAGCAAGAATTGCTGTTGCTGCCCCC
TGGGCTGTGTTGGCGATTATGAGCACCCGTGCGGAAACTGTCTCCGCTTATAACTCCCAGGCAGGTGTTGTTGTTATTAT
TCTTGGCGCATTATCCTGCGCTATTGCCTACAAGATAATGATGGTTGTTGCGCGTATCCCACAGGAAGAGAGGTATATGG
GATGA

Upstream 100 bases:

>100_bases
GTGAATGAAGGCATTATCGAGGCAAGTCCTGTATTTACCACAACAAATAATCAATTGCAGTTCACAGGCATCTACCCAGA
ACAATGGAGGGGGTTCATGA

Downstream 100 bases:

>100_bases
TTGGTCAAATTGCCCTTTCTGTTCTTTTTGCCGTAACTTTGGGGTGCGGGATTGCGAGCCTTACCTTTATGCTTTCTCCG
GTTAGCACATTTAGACGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Type II Secretion System Protein F; Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; Type II Secretion System F Domain; Flp Pilus Assembly Protein; Bacterial Type II Secretion System Protein F Domain Protein

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MNRAPLYLRTWRLMLSVALSLLLSAGNLFLLAKSKPSRRYSRFDKFHSRLIAVGLRNVSLGSFVSLTVLFGVVFAAIITL
VTGIYIFCVFGFLIGIATPILIVNYQYRRLVSLDSNIWPDIVENVISAVRVGMGLPEALCSLSRFGPVRIRQIFCNLENE
YGATGNFASAVANAKCALADPKADRILETVQLARSLGGSELIKVLRNLSEYMREDLATRAEIVGRQSWVVNAARIAVAAP
WAVLAIMSTRAETVSAYNSQAGVVVIILGALSCAIAYKIMMVVARIPQEERYMG

Sequences:

>Translated_294_residues
MNRAPLYLRTWRLMLSVALSLLLSAGNLFLLAKSKPSRRYSRFDKFHSRLIAVGLRNVSLGSFVSLTVLFGVVFAAIITL
VTGIYIFCVFGFLIGIATPILIVNYQYRRLVSLDSNIWPDIVENVISAVRVGMGLPEALCSLSRFGPVRIRQIFCNLENE
YGATGNFASAVANAKCALADPKADRILETVQLARSLGGSELIKVLRNLSEYMREDLATRAEIVGRQSWVVNAARIAVAAP
WAVLAIMSTRAETVSAYNSQAGVVVIILGALSCAIAYKIMMVVARIPQEERYMG
>Mature_294_residues
MNRAPLYLRTWRLMLSVALSLLLSAGNLFLLAKSKPSRRYSRFDKFHSRLIAVGLRNVSLGSFVSLTVLFGVVFAAIITL
VTGIYIFCVFGFLIGIATPILIVNYQYRRLVSLDSNIWPDIVENVISAVRVGMGLPEALCSLSRFGPVRIRQIFCNLENE
YGATGNFASAVANAKCALADPKADRILETVQLARSLGGSELIKVLRNLSEYMREDLATRAEIVGRQSWVVNAARIAVAAP
WAVLAIMSTRAETVSAYNSQAGVVVIILGALSCAIAYKIMMVVARIPQEERYMG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32255; Mature: 32255

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRAPLYLRTWRLMLSVALSLLLSAGNLFLLAKSKPSRRYSRFDKFHSRLIAVGLRNVSL
CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCH
GSFVSLTVLFGVVFAAIITLVTGIYIFCVFGFLIGIATPILIVNYQYRRLVSLDSNIWPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHH
IVENVISAVRVGMGLPEALCSLSRFGPVRIRQIFCNLENEYGATGNFASAVANAKCALAD
HHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCC
PKADRILETVQLARSLGGSELIKVLRNLSEYMREDLATRAEIVGRQSWVVNAARIAVAAP
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
WAVLAIMSTRAETVSAYNSQAGVVVIILGALSCAIAYKIMMVVARIPQEERYMG
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MNRAPLYLRTWRLMLSVALSLLLSAGNLFLLAKSKPSRRYSRFDKFHSRLIAVGLRNVSL
CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCH
GSFVSLTVLFGVVFAAIITLVTGIYIFCVFGFLIGIATPILIVNYQYRRLVSLDSNIWPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHH
IVENVISAVRVGMGLPEALCSLSRFGPVRIRQIFCNLENEYGATGNFASAVANAKCALAD
HHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCC
PKADRILETVQLARSLGGSELIKVLRNLSEYMREDLATRAEIVGRQSWVVNAARIAVAAP
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
WAVLAIMSTRAETVSAYNSQAGVVVIILGALSCAIAYKIMMVVARIPQEERYMG
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA