| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is ilvE [H]
Identifier: 28572712
GI number: 28572712
Start: 602111
End: 603196
Strand: Reverse
Name: ilvE [H]
Synonym: TW564
Alternate gene names: 28572712
Gene position: 603196-602111 (Counterclockwise)
Preceding gene: 28572713
Following gene: 28572711
Centisome position: 65.14
GC content: 47.61
Gene sequence:
>1086_bases TTGAGTGCCAAGAATTATAAAAAAACACTGCTAGTAAACCCCATTTCGCAGGATGAATTACAAAAGAGGCTTTCTGCCCC AGGGTTCGGGTCTGTTTTTTCTGAGCATATGGTCTCCGCGGATTGGCATCGCGATCTTGGTTGGCATGATTATCGTGTCG AACCGTATGGTCCAATTAGTCTTGCCCCCTCGGCCATGGTATTTCATTATGGACAGGAAATTTTCGAGGGGCTGAAAATT TTTCGCCATTCACAGGATAGTTCTGTGCGCGCATTTAGGCCACTGGAAAATGCAAAGAGGTTTCAAAAATCCTCCGAGAG AATCGCGCTTCCCGTTTTACCGGTTGAGGATTTTCTGCAATCGCTTCGTGAGTGGGTGATGGTTGACGGCCGCTGGGTTC CGAATGCACCGTCATGTGTTTATGCAAGACCATTTATGATAGCAACCGAGGAGGCGCTCGGTCTTCGGGCAACGTGCAGC GCCAGATATACCCTAATTTGCTGTCCGGTTGGTGATTTGTTTGGCCAAATAAGGCCCATTAAGGTACGGGTTTCTTCTAA GTATTCGAGGGCGTCCAGGGGTGGGACCGGGTCCGTTAAATTTGGTGGTAATTATGCGGCATCTATTTTGCCCCAGGTCG AGGCTGGGAATAATGGGTTTGACCAGGTTCTTTTTTTGGACTCGGCATCTTATAAAAATATTGAAGAGCTGTCCGCATCG AACATATTCTTTGTACTCTCCAGTAAGACTTTGATTACGCCGAGTCTTGATGGAACTATTCTTCCGGGTGTTACTCGTGA CAGTATCATAAGAATAGCCGAGGATTTGGGGTTCGTTGTTGAGCAAAGACAAATCAGTCTTGACGAGGTAACACATCTAT TTAGTCAGGACAAAGTAACGGAAATGTTTTGCTGCGGAACCGCGGCGTCTGTAACCCCCATTGGGTCCGTGTCTTTTGAT GGAGGCACCCTGGGCTCGGGGCAGGCGGGTCCTGTTACGATGCTCCTTCGTGAATATCTGCGGGATATACAGTTTGGTAA TCGTCCGGATAAATACAACTGGATGGTCAATCTTGAGGATACTTAG
Upstream 100 bases:
>100_bases AGAGGTTATCGGTGTATTTGGTCTGCGCTGTATATGTTGCGCCGTGGCCTTCTTGGTTATTGCCAAATGCGGCTATTTGG ATGTGTGAAATGGAAAAGCC
Downstream 100 bases:
>100_bases GTGAGTTTTTGGTCTGTAAGAAACACTTGAACAGACGGGGGTGTTTTTGTGCGTGACCCGCGTGTGCGGGTTAGATTTTG CCCGTCTCCAACTGGTGCAC
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MSAKNYKKTLLVNPISQDELQKRLSAPGFGSVFSEHMVSADWHRDLGWHDYRVEPYGPISLAPSAMVFHYGQEIFEGLKI FRHSQDSSVRAFRPLENAKRFQKSSERIALPVLPVEDFLQSLREWVMVDGRWVPNAPSCVYARPFMIATEEALGLRATCS ARYTLICCPVGDLFGQIRPIKVRVSSKYSRASRGGTGSVKFGGNYAASILPQVEAGNNGFDQVLFLDSASYKNIEELSAS NIFFVLSSKTLITPSLDGTILPGVTRDSIIRIAEDLGFVVEQRQISLDEVTHLFSQDKVTEMFCCGTAASVTPIGSVSFD GGTLGSGQAGPVTMLLREYLRDIQFGNRPDKYNWMVNLEDT
Sequences:
>Translated_361_residues MSAKNYKKTLLVNPISQDELQKRLSAPGFGSVFSEHMVSADWHRDLGWHDYRVEPYGPISLAPSAMVFHYGQEIFEGLKI FRHSQDSSVRAFRPLENAKRFQKSSERIALPVLPVEDFLQSLREWVMVDGRWVPNAPSCVYARPFMIATEEALGLRATCS ARYTLICCPVGDLFGQIRPIKVRVSSKYSRASRGGTGSVKFGGNYAASILPQVEAGNNGFDQVLFLDSASYKNIEELSAS NIFFVLSSKTLITPSLDGTILPGVTRDSIIRIAEDLGFVVEQRQISLDEVTHLFSQDKVTEMFCCGTAASVTPIGSVSFD GGTLGSGQAGPVTMLLREYLRDIQFGNRPDKYNWMVNLEDT >Mature_360_residues SAKNYKKTLLVNPISQDELQKRLSAPGFGSVFSEHMVSADWHRDLGWHDYRVEPYGPISLAPSAMVFHYGQEIFEGLKIF RHSQDSSVRAFRPLENAKRFQKSSERIALPVLPVEDFLQSLREWVMVDGRWVPNAPSCVYARPFMIATEEALGLRATCSA RYTLICCPVGDLFGQIRPIKVRVSSKYSRASRGGTGSVKFGGNYAASILPQVEAGNNGFDQVLFLDSASYKNIEELSASN IFFVLSSKTLITPSLDGTILPGVTRDSIIRIAEDLGFVVEQRQISLDEVTHLFSQDKVTEMFCCGTAASVTPIGSVSFDG GTLGSGQAGPVTMLLREYLRDIQFGNRPDKYNWMVNLEDT
Specific function: Catalyzes the reversible transfers of an amino group from glutamate to the alpha-ketoacid of the respective amino acid in the final step in the biosynthesis of branchedchain amino acids. The amino acids can be ranked in the following order with respect to
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI296010904, Length=362, Percent_Identity=35.6353591160221, Blast_Score=221, Evalue=9e-58, Organism=Homo sapiens, GI296010906, Length=362, Percent_Identity=35.6353591160221, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI38176287, Length=362, Percent_Identity=35.6353591160221, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI50658084, Length=352, Percent_Identity=34.0909090909091, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI296010902, Length=362, Percent_Identity=30.939226519337, Blast_Score=175, Evalue=5e-44, Organism=Homo sapiens, GI296010900, Length=362, Percent_Identity=30.939226519337, Blast_Score=175, Evalue=6e-44, Organism=Homo sapiens, GI258614015, Length=294, Percent_Identity=34.3537414965986, Blast_Score=167, Evalue=2e-41, Organism=Escherichia coli, GI48994963, Length=294, Percent_Identity=29.9319727891156, Blast_Score=115, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17568601, Length=347, Percent_Identity=33.1412103746398, Blast_Score=203, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17565728, Length=343, Percent_Identity=31.4868804664723, Blast_Score=169, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6322608, Length=342, Percent_Identity=35.9649122807018, Blast_Score=212, Evalue=6e-56, Organism=Saccharomyces cerevisiae, GI6322002, Length=348, Percent_Identity=35.9195402298851, Blast_Score=209, Evalue=5e-55, Organism=Drosophila melanogaster, GI24641779, Length=331, Percent_Identity=36.2537764350453, Blast_Score=205, Evalue=4e-53,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 40059; Mature: 39928
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKNYKKTLLVNPISQDELQKRLSAPGFGSVFSEHMVSADWHRDLGWHDYRVEPYGPIS CCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHCCCCCCCEECCCCCCCC LAPSAMVFHYGQEIFEGLKIFRHSQDSSVRAFRPLENAKRFQKSSERIALPVLPVEDFLQ CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHCCCEEEEEEECHHHHHH SLREWVMVDGRWVPNAPSCVYARPFMIATEEALGLRATCSARYTLICCPVGDLFGQIRPI HHHHHHEECCEECCCCCCEEEECCEEEEEHHHCCEEEECCCCEEEEEECHHHHHCCEEEE KVRVSSKYSRASRGGTGSVKFGGNYAASILPQVEAGNNGFDQVLFLDSASYKNIEELSAS EEEECCCHHHHCCCCCCEEEECCCCHHHHCEEECCCCCCCCEEEEEECCCCCCHHHHCCC NIFFVLSSKTLITPSLDGTILPGVTRDSIIRIAEDLGFVVEQRQISLDEVTHLFSQDKVT CEEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHH EMFCCGTAASVTPIGSVSFDGGTLGSGQAGPVTMLLREYLRDIQFGNRPDKYNWMVNLED HHEECCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECC T C >Mature Secondary Structure SAKNYKKTLLVNPISQDELQKRLSAPGFGSVFSEHMVSADWHRDLGWHDYRVEPYGPIS CCCCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHCCCCCCCEECCCCCCCC LAPSAMVFHYGQEIFEGLKIFRHSQDSSVRAFRPLENAKRFQKSSERIALPVLPVEDFLQ CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHCCCEEEEEEECHHHHHH SLREWVMVDGRWVPNAPSCVYARPFMIATEEALGLRATCSARYTLICCPVGDLFGQIRPI HHHHHHEECCEECCCCCCEEEECCEEEEEHHHCCEEEECCCCEEEEEECHHHHHCCEEEE KVRVSSKYSRASRGGTGSVKFGGNYAASILPQVEAGNNGFDQVLFLDSASYKNIEELSAS EEEECCCHHHHCCCCCCEEEECCCCHHHHCEEECCCCCCCCEEEEEECCCCCCHHHHCCC NIFFVLSSKTLITPSLDGTILPGVTRDSIIRIAEDLGFVVEQRQISLDEVTHLFSQDKVT CEEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHH EMFCCGTAASVTPIGSVSFDGGTLGSGQAGPVTMLLREYLRDIQFGNRPDKYNWMVNLED HHEECCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECC T C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]