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The map label for this gene is 28572679

Identifier: 28572679

GI number: 28572679

Start: 569392

End: 569913

Strand: Direct

Name: 28572679

Synonym: TW530

Alternate gene names: NA

Gene position: 569392-569913 (Clockwise)

Preceding gene: 28572668

Following gene: 28572680

Centisome position: 61.49

GC content: 42.91

Gene sequence:

>522_bases
TTGACTAAGGGAAGGGCAACGCCCAAGAGGCGAGAGAGTGAAAGGAAAAAGAAGAACCCCGTTATACCGAGGGACAGAAA
AGAAGCTGCAAGGAAAGCCCGAGAAGACCTCAAACAAAAGAGACAGCTTGCCCGGCAGGGCTACAGAGAAGGCGACGAGC
GCTATTTGCCCCTGAGAGATCGTGGGGTTCAGAAAAAACGTGTTAGAGAATATGTTGACTCGAATATCTTTGTCTCCGAG
TTTTTAATGCCGGTTATTCTGCTAGTTCTTGTTTTGAGTCTTATACCCTCCATAAGATTGCAAATATTTCTTGAATATTT
CCTAATAATTTTGTTTGCTGTGCTTCTGACAGAAAGTACACTTTTAGCTTTCAGGATAAAAAGGGTGTTGTCAAGAGAAT
TTAGCACCTTTGAAAAGGGTGTTAGGTTATACGCCATAAGCAGAATGGTTGTTATACGCCCCTTGCGCATGCCGAAAACC
AGTGTAAAACTGGGCTTAGTATTTGGTAAAAGAAAGGGCTAA

Upstream 100 bases:

>100_bases
AATAGAGTAGCTCATTGCCTAATTTTTACTGCCTAATTTTTCTTACCCAAGTATAGTTATTTATTGAAATGTGGATTTTA
GAAATTAACTGTTTTAGGCC

Downstream 100 bases:

>100_bases
CTTACAAAAAACAAAATGACCAATAACGAGATAATTGCAGCAACCGACGGATCATCACTCGCCAACCCGGGGCCATCCGG
CTGGGCTTGGTACGTCGACG

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MTKGRATPKRRESERKKKNPVIPRDRKEAARKAREDLKQKRQLARQGYREGDERYLPLRDRGVQKKRVREYVDSNIFVSE
FLMPVILLVLVLSLIPSIRLQIFLEYFLIILFAVLLTESTLLAFRIKRVLSREFSTFEKGVRLYAISRMVVIRPLRMPKT
SVKLGLVFGKRKG

Sequences:

>Translated_173_residues
MTKGRATPKRRESERKKKNPVIPRDRKEAARKAREDLKQKRQLARQGYREGDERYLPLRDRGVQKKRVREYVDSNIFVSE
FLMPVILLVLVLSLIPSIRLQIFLEYFLIILFAVLLTESTLLAFRIKRVLSREFSTFEKGVRLYAISRMVVIRPLRMPKT
SVKLGLVFGKRKG
>Mature_172_residues
TKGRATPKRRESERKKKNPVIPRDRKEAARKAREDLKQKRQLARQGYREGDERYLPLRDRGVQKKRVREYVDSNIFVSEF
LMPVILLVLVLSLIPSIRLQIFLEYFLIILFAVLLTESTLLAFRIKRVLSREFSTFEKGVRLYAISRMVVIRPLRMPKTS
VKLGLVFGKRKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021403 [H]

Pfam domain/function: PF11241 DUF3043 [H]

EC number: NA

Molecular weight: Translated: 20375; Mature: 20244

Theoretical pI: Translated: 11.75; Mature: 11.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKGRATPKRRESERKKKNPVIPRDRKEAARKAREDLKQKRQLARQGYREGDERYLPLRD
CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
RGVQKKRVREYVDSNIFVSEFLMPVILLVLVLSLIPSIRLQIFLEYFLIILFAVLLTEST
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAFRIKRVLSREFSTFEKGVRLYAISRMVVIRPLRMPKTSVKLGLVFGKRKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
TKGRATPKRRESERKKKNPVIPRDRKEAARKAREDLKQKRQLARQGYREGDERYLPLRD
CCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
RGVQKKRVREYVDSNIFVSEFLMPVILLVLVLSLIPSIRLQIFLEYFLIILFAVLLTEST
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAFRIKRVLSREFSTFEKGVRLYAISRMVVIRPLRMPKTSVKLGLVFGKRKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]