| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is acpP
Identifier: 28572667
GI number: 28572667
Start: 558218
End: 558466
Strand: Direct
Name: acpP
Synonym: TW518
Alternate gene names: 28572667
Gene position: 558218-558466 (Clockwise)
Preceding gene: 161501889
Following gene: 28572668
Centisome position: 60.29
GC content: 41.77
Gene sequence:
>249_bases GTGTCTTTATCAAGGGAGAAAGTTCTCGAAAGTATTGCCCAGATTGTTCATGATGAAACTGGGATAGATAAAGGTAGTGT CCAGCTCGACAAGGCATTCGTTGATGATTTAGATATAGATTCAATTTCCATGATGACGATAGTTGTCAATGCTGAGGAGA AGTACGGTATAGAAATTCCCGACGATAAGGTCAGGGAATTGCGTACGGTGGGTGATGCCGTTGACTTTATTATTGCTGCC AAGGCATAA
Upstream 100 bases:
>100_bases GGACAAACAGTTGTAATGCCGTAACATATTCCCGATGATTTTGTCCATTCACAGTGTCAGCCGTAAAATTGGTTTTGTTT TAGTCTAGAGAGGTGTTTGC
Downstream 100 bases:
>100_bases TTGTCCAGACAAGTTGTTGTTACAGGTCTAGGCGTTTGTTGTCCCCTTGGGATCGGGACTGAACTGGCCTGGCAGGCGCT CCTGGATGGCGAGAGTGGTG
Product: acyl carrier protein
Products: NA
Alternate protein names: ACP
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MSLSREKVLESIAQIVHDETGIDKGSVQLDKAFVDDLDIDSISMMTIVVNAEEKYGIEIPDDKVRELRTVGDAVDFIIAA KA
Sequences:
>Translated_82_residues MSLSREKVLESIAQIVHDETGIDKGSVQLDKAFVDDLDIDSISMMTIVVNAEEKYGIEIPDDKVRELRTVGDAVDFIIAA KA >Mature_81_residues SLSREKVLESIAQIVHDETGIDKGSVQLDKAFVDDLDIDSISMMTIVVNAEEKYGIEIPDDKVRELRTVGDAVDFIIAAK A
Specific function: Carrier of the growing fatty acid chain in fatty acid biosynthesis
COG id: COG0236
COG function: function code IQ; Acyl carrier protein
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACP_TROW8 (Q83NH7)
Other databases:
- EMBL: BX251411 - RefSeq: NP_789447.1 - ProteinModelPortal: Q83NH7 - SMR: Q83NH7 - STRING: Q83NH7 - GeneID: 1064722 - GenomeReviews: BX072543_GR - KEGG: tws:TW518 - eggNOG: COG0236 - HOGENOM: HBG755218 - OMA: VNEIAGI - PhylomeDB: Q83NH7 - ProtClustDB: PRK00982 - BioCyc: TWHI218496:TW0492-MONOMER - GO: GO:0005737 - HAMAP: MF_01217 - InterPro: IPR003231 - InterPro: IPR009081 - InterPro: IPR006163 - Gene3D: G3DSA:1.10.1200.10
Pfam domain/function: PF00550 PP-binding; SSF47336 ACP_like
EC number: NA
Molecular weight: Translated: 9022; Mature: 8891
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: PS50075 ACP_DOMAIN; PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSREKVLESIAQIVHDETGIDKGSVQLDKAFVDDLDIDSISMMTIVVNAEEKYGIEIP CCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCCCCCEEEEEEEEECCCCCCCCCC DDKVRELRTVGDAVDFIIAAKA HHHHHHHHHHHHHHHHHEECCC >Mature Secondary Structure SLSREKVLESIAQIVHDETGIDKGSVQLDKAFVDDLDIDSISMMTIVVNAEEKYGIEIP CCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCCCCCEEEEEEEEECCCCCCCCCC DDKVRELRTVGDAVDFIIAAKA HHHHHHHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12606174