The gene/protein map for NC_011369 is currently unavailable.
Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is 28572661

Identifier: 28572661

GI number: 28572661

Start: 551089

End: 551790

Strand: Reverse

Name: 28572661

Synonym: TW512

Alternate gene names: NA

Gene position: 551790-551089 (Counterclockwise)

Preceding gene: 28572662

Following gene: 28572657

Centisome position: 59.59

GC content: 43.16

Gene sequence:

>702_bases
GTGTCTAGTTCTTATACGGAAAAGCACAGGAATCTATTATCTGATTTACAAACACTTGATACAGAGATTCAACGCTGTCA
TGATGCAGAGTTATCGCGCAATAGGCGTCTTGATACACTTAGCGCAGCTTTGCGTGCCGCAAATGGGACCTTGCTTGCCT
TAACTGTTGGCTCAGAGAAAGCTAATGCTCTTTATGAAAAGTATAAGAGCGATCTTGCAAGTGCAATGCAAAGAAAAACA
CGTGTGAATAACCTGCTTCTTTCAGCTAAAAAACCAAAAGAATTACACAGTTTACAGAAGGAGGTGACAGGGTTAGATCG
CAGATTAACCGGATATGCTGACAGGCTAAGCGCAGCAGATGAGGCAAGGTCTGCTTATATGAGTCGCTTGCAGCAAATTA
ATTCCAGAATTGTTGAAATAAAGGATGAAATGCGCAGACTCAAAGACCAGAATGATCAGCGGGATGCTGCATCCGACATG
TTACTAGAAAAGCGACAGGACATTGTAGGCGCTATACCGGACGAGCTTTTGCAGATGTATAACAAGCGGAAAGATGGCCT
GGGGTATGCTGTTGCAACTATAGAAAACGATACATGCACGGGGTGCTGTCTTACTTTAAACTGCTCAGATATTCAAAGAT
GGCAGAGTGCTGGGGGCAAGAAGCCTTTCTTTTGCCCTTACTGTGATTGTTTTCTTATTTGA

Upstream 100 bases:

>100_bases
GAATGGCTCTGGCTTGGATATGCCGCGGAGTTGATAAAGAAACGTTTTCCGGATTTGTCGATTGAAGTAAGTTCTCTTAG
GACTGATCCGTGGGATTTTC

Downstream 100 bases:

>100_bases
TAGACTCTATCCGGAGGGCTTGCGGGCGGTCGCGGTGTCTATTGGTACCGAGGAACGTCCGGGCTCCGTAGAGCAAGGCG
GTGGGTAACGCCCACCCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSSSYTEKHRNLLSDLQTLDTEIQRCHDAELSRNRRLDTLSAALRAANGTLLALTVGSEKANALYEKYKSDLASAMQRKT
RVNNLLLSAKKPKELHSLQKEVTGLDRRLTGYADRLSAADEARSAYMSRLQQINSRIVEIKDEMRRLKDQNDQRDAASDM
LLEKRQDIVGAIPDELLQMYNKRKDGLGYAVATIENDTCTGCCLTLNCSDIQRWQSAGGKKPFFCPYCDCFLI

Sequences:

>Translated_233_residues
MSSSYTEKHRNLLSDLQTLDTEIQRCHDAELSRNRRLDTLSAALRAANGTLLALTVGSEKANALYEKYKSDLASAMQRKT
RVNNLLLSAKKPKELHSLQKEVTGLDRRLTGYADRLSAADEARSAYMSRLQQINSRIVEIKDEMRRLKDQNDQRDAASDM
LLEKRQDIVGAIPDELLQMYNKRKDGLGYAVATIENDTCTGCCLTLNCSDIQRWQSAGGKKPFFCPYCDCFLI
>Mature_232_residues
SSSYTEKHRNLLSDLQTLDTEIQRCHDAELSRNRRLDTLSAALRAANGTLLALTVGSEKANALYEKYKSDLASAMQRKTR
VNNLLLSAKKPKELHSLQKEVTGLDRRLTGYADRLSAADEARSAYMSRLQQINSRIVEIKDEMRRLKDQNDQRDAASDML
LEKRQDIVGAIPDELLQMYNKRKDGLGYAVATIENDTCTGCCLTLNCSDIQRWQSAGGKKPFFCPYCDCFLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26333; Mature: 26202

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSYTEKHRNLLSDLQTLDTEIQRCHDAELSRNRRLDTLSAALRAANGTLLALTVGSEK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCHH
ANALYEKYKSDLASAMQRKTRVNNLLLSAKKPKELHSLQKEVTGLDRRLTGYADRLSAAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EARSAYMSRLQQINSRIVEIKDEMRRLKDQNDQRDAASDMLLEKRQDIVGAIPDELLQMY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
NKRKDGLGYAVATIENDTCTGCCLTLNCSDIQRWQSAGGKKPFFCPYCDCFLI
HCCCCCCCEEEEEECCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCHHHHCC
>Mature Secondary Structure 
SSSYTEKHRNLLSDLQTLDTEIQRCHDAELSRNRRLDTLSAALRAANGTLLALTVGSEK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCHH
ANALYEKYKSDLASAMQRKTRVNNLLLSAKKPKELHSLQKEVTGLDRRLTGYADRLSAAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EARSAYMSRLQQINSRIVEIKDEMRRLKDQNDQRDAASDMLLEKRQDIVGAIPDELLQMY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
NKRKDGLGYAVATIENDTCTGCCLTLNCSDIQRWQSAGGKKPFFCPYCDCFLI
HCCCCCCCEEEEEECCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA