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The map label for this gene is 28572662

Identifier: 28572662

GI number: 28572662

Start: 551783

End: 552622

Strand: Reverse

Name: 28572662

Synonym: TW513

Alternate gene names: NA

Gene position: 552622-551783 (Counterclockwise)

Preceding gene: 28572663

Following gene: 28572661

Centisome position: 59.68

GC content: 46.55

Gene sequence:

>840_bases
TTGGCCCGCTCTTTGGATGTATTGTGTGCCACCTTTGAGAGCATGTGGCCGTCTTCTGATGCCTGCGAGTGGGATAATGT
CGGCTTGCTATGCGGCTTTCCTGGTCTCAGTGTTGAGCGTGTTCATTTCGTTGTCGATGTTACATCTGCAACTATAAACG
AGGCAATAAAAGCGGGGGCAGACTTGCTGGTATCCCACCATCCACTGATATTCAAGCCGATTAAGAAGCTAACTTGTGAC
ACTTACGAGAGCTTTCTTCTTTCGCGACTTATTGAATCTAAGTGTGCATTATTTTCTGTGCATACAAATGCTGATATTGC
TCCCGACGGTCTTGCACAGCATTGGTCTCATCTCATTGGGCTTCGTAATGTGAAACCTGTGAGATATTGCCCCGAATCCA
CTTCCGTTGACCCTACAGAGACGCAATACGGCTTTGGAAGAATTGGCGATCTTGCTGAGCCAGTGAGCCTTTATGACTTT
GCAAAAGACTTAAAGGCATTTTTGCCAGAGACCGTGGGGGGCATAATGGTTGCGGGAGATGAAGCCAAGGAGATACACAG
TGCTGCAGTAGTTCCCGGTGCGGGTGATGATTTCTTGGATCTTGTACTTGATTTACCTGCAGATGTGTATGTAACATCTG
ATTTGCGACATCATCCGGCTATTGGGTTCAGGGAAAAGGGTATTCTTATCCGGAAAAACACAGCTCTTATTTGTGTTTCA
CATTGGGCTTCCGAATGGCTCTGGCTTGGATATGCCGCGGAGTTGATAAAGAAACGTTTTCCGGATTTGTCGATTGAAGT
AAGTTCTCTTAGGACTGATCCGTGGGATTTTCGTGTCTAG

Upstream 100 bases:

>100_bases
TGATTGGGCCTTTAGCTCAGCTGGCTAGAGCGCCACGTTTACACCGTGGAGGTCATCGGTTCGAGTCCGGTAGGGCCCAC
TTTTCTTGTGGAGTGTGAAA

Downstream 100 bases:

>100_bases
TTCTTATACGGAAAAGCACAGGAATCTATTATCTGATTTACAAACACTTGATACAGAGATTCAACGCTGTCATGATGCAG
AGTTATCGCGCAATAGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MARSLDVLCATFESMWPSSDACEWDNVGLLCGFPGLSVERVHFVVDVTSATINEAIKAGADLLVSHHPLIFKPIKKLTCD
TYESFLLSRLIESKCALFSVHTNADIAPDGLAQHWSHLIGLRNVKPVRYCPESTSVDPTETQYGFGRIGDLAEPVSLYDF
AKDLKAFLPETVGGIMVAGDEAKEIHSAAVVPGAGDDFLDLVLDLPADVYVTSDLRHHPAIGFREKGILIRKNTALICVS
HWASEWLWLGYAAELIKKRFPDLSIEVSSLRTDPWDFRV

Sequences:

>Translated_279_residues
MARSLDVLCATFESMWPSSDACEWDNVGLLCGFPGLSVERVHFVVDVTSATINEAIKAGADLLVSHHPLIFKPIKKLTCD
TYESFLLSRLIESKCALFSVHTNADIAPDGLAQHWSHLIGLRNVKPVRYCPESTSVDPTETQYGFGRIGDLAEPVSLYDF
AKDLKAFLPETVGGIMVAGDEAKEIHSAAVVPGAGDDFLDLVLDLPADVYVTSDLRHHPAIGFREKGILIRKNTALICVS
HWASEWLWLGYAAELIKKRFPDLSIEVSSLRTDPWDFRV
>Mature_278_residues
ARSLDVLCATFESMWPSSDACEWDNVGLLCGFPGLSVERVHFVVDVTSATINEAIKAGADLLVSHHPLIFKPIKKLTCDT
YESFLLSRLIESKCALFSVHTNADIAPDGLAQHWSHLIGLRNVKPVRYCPESTSVDPTETQYGFGRIGDLAEPVSLYDFA
KDLKAFLPETVGGIMVAGDEAKEIHSAAVVPGAGDDFLDLVLDLPADVYVTSDLRHHPAIGFREKGILIRKNTALICVSH
WASEWLWLGYAAELIKKRFPDLSIEVSSLRTDPWDFRV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Homo sapiens, GI215272362, Length=140, Percent_Identity=31.4285714285714, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI215272360, Length=140, Percent_Identity=31.4285714285714, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI56605983, Length=140, Percent_Identity=31.4285714285714, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI209862879, Length=140, Percent_Identity=31.4285714285714, Blast_Score=75, Evalue=9e-14,
Organism=Saccharomyces cerevisiae, GI6321217, Length=294, Percent_Identity=27.891156462585, Blast_Score=73, Evalue=5e-14,
Organism=Drosophila melanogaster, GI19921430, Length=276, Percent_Identity=24.6376811594203, Blast_Score=81, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 30811; Mature: 30680

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSLDVLCATFESMWPSSDACEWDNVGLLCGFPGLSVERVHFVVDVTSATINEAIKAGA
CCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEEEEEEEHHHHHHHHHHHCH
DLLVSHHPLIFKPIKKLTCDTYESFLLSRLIESKCALFSVHTNADIAPDGLAQHWSHLIG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHH
LRNVKPVRYCPESTSVDPTETQYGFGRIGDLAEPVSLYDFAKDLKAFLPETVGGIMVAGD
CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECC
EAKEIHSAAVVPGAGDDFLDLVLDLPADVYVTSDLRHHPAIGFREKGILIRKNTALICVS
HHHHHHHHEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEECCCEEEEEE
HWASEWLWLGYAAELIKKRFPDLSIEVSSLRTDPWDFRV
HHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCCCCC
>Mature Secondary Structure 
ARSLDVLCATFESMWPSSDACEWDNVGLLCGFPGLSVERVHFVVDVTSATINEAIKAGA
CCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEEEEEEEHHHHHHHHHHHCH
DLLVSHHPLIFKPIKKLTCDTYESFLLSRLIESKCALFSVHTNADIAPDGLAQHWSHLIG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHH
LRNVKPVRYCPESTSVDPTETQYGFGRIGDLAEPVSLYDFAKDLKAFLPETVGGIMVAGD
CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECC
EAKEIHSAAVVPGAGDDFLDLVLDLPADVYVTSDLRHHPAIGFREKGILIRKNTALICVS
HHHHHHHHEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEECCCEEEEEE
HWASEWLWLGYAAELIKKRFPDLSIEVSSLRTDPWDFRV
HHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]