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The map label for this gene is ycfF [C]

Identifier: 28572639

GI number: 28572639

Start: 528251

End: 528574

Strand: Reverse

Name: ycfF [C]

Synonym: TW490

Alternate gene names: 28572639

Gene position: 528574-528251 (Counterclockwise)

Preceding gene: 28572640

Following gene: 28572638

Centisome position: 57.09

GC content: 42.28

Gene sequence:

>324_bases
ATGACGTCTGTTTTTACAAGAATCATAAATCGTGAGGTTCCGGCAGAAATTCTTTTTGAAGATGATGAATTTATATGTAT
AGAGGATATTGCGCCAAAGGCGAAAATTCATTATCTTGTAATAGCGAAACATCCGTGGAAAGACGTAACAGAGGCGGTGC
GTGATGACCCCCTCTTTGTGAATAAAATTCTTGCAATAGCGGTTAGGCTAACAAAGGATTTTGGCAGTCAGTTTAGGCTC
ATTTTCAATACCGGGGCCCTTGTCGGGCAGACTGTTTTTCATGTTCATGCCCACATATTGTCGGGTGAAGCACTGGGTGA
GTGA

Upstream 100 bases:

>100_bases
TTAAATCCTCCACAGCGAGTGTTGCGGCCTTGTCGCTTGTTAATTTTTTCCTGGGGCGATGGTAATTTTCCTGCCTCATC
GGGTATTATCATAGCCAGAT

Downstream 100 bases:

>100_bases
CAGGTTTGCTGTATCTGCAGAACAGCTCGGGGTACAACGATTGTTATTTTAAAACCGAATCTCTAGTTGATTTTCTCTAC
CGTACGTTATTCATAGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MTSVFTRIINREVPAEILFEDDEFICIEDIAPKAKIHYLVIAKHPWKDVTEAVRDDPLFVNKILAIAVRLTKDFGSQFRL
IFNTGALVGQTVFHVHAHILSGEALGE

Sequences:

>Translated_107_residues
MTSVFTRIINREVPAEILFEDDEFICIEDIAPKAKIHYLVIAKHPWKDVTEAVRDDPLFVNKILAIAVRLTKDFGSQFRL
IFNTGALVGQTVFHVHAHILSGEALGE
>Mature_106_residues
TSVFTRIINREVPAEILFEDDEFICIEDIAPKAKIHYLVIAKHPWKDVTEAVRDDPLFVNKILAIAVRLTKDFGSQFRLI
FNTGALVGQTVFHVHAHILSGEALGE

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI14211923, Length=105, Percent_Identity=36.1904761904762, Blast_Score=90, Evalue=4e-19,
Organism=Homo sapiens, GI4885413, Length=105, Percent_Identity=35.2380952380952, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787346, Length=107, Percent_Identity=31.7757009345794, Blast_Score=70, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17506713, Length=105, Percent_Identity=38.0952380952381, Blast_Score=87, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24581222, Length=105, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=4e-14,
Organism=Drosophila melanogaster, GI28574010, Length=105, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 12072; Mature: 11941

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSVFTRIINREVPAEILFEDDEFICIEDIAPKAKIHYLVIAKHPWKDVTEAVRDDPLFV
CHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCCEEEEEEEECCCCHHHHHHHCCCCHHH
NKILAIAVRLTKDFGSQFRLIFNTGALVGQTVFHVHAHILSGEALGE
HHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TSVFTRIINREVPAEILFEDDEFICIEDIAPKAKIHYLVIAKHPWKDVTEAVRDDPLFV
HHHHHHHHCCCCCCEEEECCCCEEEEECCCCCCEEEEEEEECCCCHHHHHHHCCCCHHH
NKILAIAVRLTKDFGSQFRLIFNTGALVGQTVFHVHAHILSGEALGE
HHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]