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The map label for this gene is chvE [H]

Identifier: 28572594

GI number: 28572594

Start: 482886

End: 483956

Strand: Direct

Name: chvE [H]

Synonym: TW443

Alternate gene names: 28572594

Gene position: 482886-483956 (Clockwise)

Preceding gene: 28572593

Following gene: 28572595

Centisome position: 52.15

GC content: 45.28

Gene sequence:

>1071_bases
ATGTCCATCTCAAAAGGGTTATTCAGGGCGGTTTTATTTACGGCTGCCGCGTCATTGTTTTTAATGTCCTGCCTTGGCGG
CGGTAGGGATGAGAGTAAAACGGGCGGTGTGTCATACACGAAGGGATTCCCGTCGGATTCTCTTATTGGTGTGGCTATCG
CGAAGAAAACAAGTCAAAACCAGGTTGATGCTGGAAATTTCTTCGAGGAGCTGCTTAAAGACGCCGGTTTCAAATCCAAA
GTGGTATTTGCCAATAATGGCGTTTCAGAACAGCAAAGCCAAATTGACAATATGATTGCTTCTGGAGCAAAAGTAATCGT
TGTTAATGCAGTTGACTCGAGTCTTTTGGGTCCGCAGCTAAAACGAGCTAGGCAAGCTGGCGTAATAGTCTTTGACTACG
ATAGGTTGCTTGAAAACACAAAAGATGTTGACTTTTATGTTACATACAACGCTCGTACGGTAGGAATTCTTCAGGCCAAT
GCTTTGCTGCAAGGCTTAGAGAAGAAAAAGCCGGGTGGTCCGTGGAATATTGAGCTTTTTGCTGGCTCCCCTGATGACAG
CAATAGTAGGATCTTCTTTGATTCCGCGATGAGTGTTCTGAACGAAAAAATCAAGTCTGGCAAGCTCATTGTCGTGAGTG
GTCAGACGGATTTTGCGAAGGCTGTAACTCAGGATTGGTCAGCTGAAAATGCCCAGAAGCGCATGGATGTTCTTTTGTCT
ACGTATTACAACACAAAGCAGTTGGATGGCGTTCTTGGGCCAAATGATGTCCTTGCCAGGGCTATTCTCCGCTCTGTCGA
GCTAGCTGGCAAGCCTGTGCCCGTTGTGGTTGGGCAAGATGCTGAAGAGCCTTCGTTAAAGCTCATTGCTGCTGGTAAGC
AATACTCGACAGTTGCGAAGAGTACAAGAGCTCTTGTTGAAGCAACTGTTAAGGCTATCAAGCAGCTTGCCGATAAGAAA
CTGCCTGAGACAAACAGTAAATCTAATAATGGTGAGGTGGAAATTCCAACGATTCTCCTGACGCCTAAAATTATAACGAA
AGAGAATCTTGACACCATTTACAAAAAGTAG

Upstream 100 bases:

>100_bases
ATCAGATTGTTTGTACGACGAAGTGGACTTTCGCGGGATAAGGCCGGTGGTCGAGGATGATCCGGTCTGTTGAGTTTGAG
AGTAATTGAAAGGATTCGGT

Downstream 100 bases:

>100_bases
GCAGTAAGAATATAGCAGCGGCGGTGTCTATTGCCGCTGCTATATTTGAGGTATCGTGCGCCTGTACCGTCCCCTCTTTT
ATGCCTGTTTACTTCTGAGC

Product: sugar ABC transporter substrate-binding lipoprotein subunit

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MSISKGLFRAVLFTAAASLFLMSCLGGGRDESKTGGVSYTKGFPSDSLIGVAIAKKTSQNQVDAGNFFEELLKDAGFKSK
VVFANNGVSEQQSQIDNMIASGAKVIVVNAVDSSLLGPQLKRARQAGVIVFDYDRLLENTKDVDFYVTYNARTVGILQAN
ALLQGLEKKKPGGPWNIELFAGSPDDSNSRIFFDSAMSVLNEKIKSGKLIVVSGQTDFAKAVTQDWSAENAQKRMDVLLS
TYYNTKQLDGVLGPNDVLARAILRSVELAGKPVPVVVGQDAEEPSLKLIAAGKQYSTVAKSTRALVEATVKAIKQLADKK
LPETNSKSNNGEVEIPTILLTPKIITKENLDTIYKK

Sequences:

>Translated_356_residues
MSISKGLFRAVLFTAAASLFLMSCLGGGRDESKTGGVSYTKGFPSDSLIGVAIAKKTSQNQVDAGNFFEELLKDAGFKSK
VVFANNGVSEQQSQIDNMIASGAKVIVVNAVDSSLLGPQLKRARQAGVIVFDYDRLLENTKDVDFYVTYNARTVGILQAN
ALLQGLEKKKPGGPWNIELFAGSPDDSNSRIFFDSAMSVLNEKIKSGKLIVVSGQTDFAKAVTQDWSAENAQKRMDVLLS
TYYNTKQLDGVLGPNDVLARAILRSVELAGKPVPVVVGQDAEEPSLKLIAAGKQYSTVAKSTRALVEATVKAIKQLADKK
LPETNSKSNNGEVEIPTILLTPKIITKENLDTIYKK
>Mature_355_residues
SISKGLFRAVLFTAAASLFLMSCLGGGRDESKTGGVSYTKGFPSDSLIGVAIAKKTSQNQVDAGNFFEELLKDAGFKSKV
VFANNGVSEQQSQIDNMIASGAKVIVVNAVDSSLLGPQLKRARQAGVIVFDYDRLLENTKDVDFYVTYNARTVGILQANA
LLQGLEKKKPGGPWNIELFAGSPDDSNSRIFFDSAMSVLNEKIKSGKLIVVSGQTDFAKAVTQDWSAENAQKRMDVLLST
YYNTKQLDGVLGPNDVLARAILRSVELAGKPVPVVVGQDAEEPSLKLIAAGKQYSTVAKSTRALVEATVKAIKQLADKKL
PETNSKSNNGEVEIPTILLTPKIITKENLDTIYKK

Specific function: Required for effective transcriptional induction of the vir genes by monosaccharides in response to plant signals and for normal growth and chemotaxis towards certain sugars. Function as a periplasmic multiple sugar-binding receptor protein. It does not i

COG id: COG4213

COG function: function code G; ABC-type xylose transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1789990, Length=282, Percent_Identity=35.1063829787234, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1788473, Length=284, Percent_Identity=28.169014084507, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 38345; Mature: 38214

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISKGLFRAVLFTAAASLFLMSCLGGGRDESKTGGVSYTKGFPSDSLIGVAIAKKTSQN
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCC
QVDAGNFFEELLKDAGFKSKVVFANNGVSEQQSQIDNMIASGAKVIVVNAVDSSLLGPQL
CCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCHHCCHHH
KRARQAGVIVFDYDRLLENTKDVDFYVTYNARTVGILQANALLQGLEKKKPGGPWNIELF
HHHHHCCEEEEEHHHHHCCCCCEEEEEEECCEEEEEEEHHHHHHHHHHCCCCCCEEEEEE
AGSPDDSNSRIFFDSAMSVLNEKIKSGKLIVVSGQTDFAKAVTQDWSAENAQKRMDVLLS
ECCCCCCCCEEEHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHH
TYYNTKQLDGVLGPNDVLARAILRSVELAGKPVPVVVGQDAEEPSLKLIAAGKQYSTVAK
HHCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCHHHHHHH
STRALVEATVKAIKQLADKKLPETNSKSNNGEVEIPTILLTPKIITKENLDTIYKK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCHHCCCCHHHHHCC
>Mature Secondary Structure 
SISKGLFRAVLFTAAASLFLMSCLGGGRDESKTGGVSYTKGFPSDSLIGVAIAKKTSQN
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCC
QVDAGNFFEELLKDAGFKSKVVFANNGVSEQQSQIDNMIASGAKVIVVNAVDSSLLGPQL
CCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCHHCCHHH
KRARQAGVIVFDYDRLLENTKDVDFYVTYNARTVGILQANALLQGLEKKKPGGPWNIELF
HHHHHCCEEEEEHHHHHCCCCCEEEEEEECCEEEEEEEHHHHHHHHHHCCCCCCEEEEEE
AGSPDDSNSRIFFDSAMSVLNEKIKSGKLIVVSGQTDFAKAVTQDWSAENAQKRMDVLLS
ECCCCCCCCEEEHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHH
TYYNTKQLDGVLGPNDVLARAILRSVELAGKPVPVVVGQDAEEPSLKLIAAGKQYSTVAK
HHCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCHHHHHHH
STRALVEATVKAIKQLADKKLPETNSKSNNGEVEIPTILLTPKIITKENLDTIYKK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCHHCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8253785; 2156804; 11743193; 11743194 [H]