The gene/protein map for NC_004551 is currently unavailable.
Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is pgi [H]

Identifier: 28572580

GI number: 28572580

Start: 466665

End: 468308

Strand: Reverse

Name: pgi [H]

Synonym: TW429

Alternate gene names: 28572580

Gene position: 468308-466665 (Counterclockwise)

Preceding gene: 28572581

Following gene: 28572579

Centisome position: 50.58

GC content: 45.38

Gene sequence:

>1644_bases
GTGTTGCGCGATTTGTCGCGTAGTTGGGTAGTTTTGGAAGTTTTATCAAGTGAGAAAGAAAAGATCAGGTGCATTCTTGA
TACCCTAGTTGATAAAAAAATTGCTTCGCGTATCTCTGCGAAGGATTGCTCGGTATGGGTGGAAAGTGCAAGAGAGGAAG
CCTCAAGACGTCTTGGATGGCTTGATGTATACGATCACTCTCTCCCCGTTGCACAATCAGCAAAGGCGTTAAGAAATGAT
CTTCTCAAAAATGGGGTTGACCGCTTTGTCTTGAGTGGCATGGGTGGCTCTTCTCTCGCTTCTGAGTTGATGAGTGATTA
CTTTCAAACATCTCTTATTGTTCTTGATACAACCGATCCTGATCACGTATTCAGAGTCGCATCCGAGCCACTCGACAGGA
CTTCCCTCATATTATCTTCCAAATCCGGTAGCACGCTTGAGGTTGATTCGCACAGGCGCTTGTTTGAAAAACACTTTAAA
GGCTCTGGAATAGACCCAAGTAGCCGTATTATTTGCATAACTGACCCTAACTCACCATTAGACTTACTCGCGCAAGAAAA
GGGTTACAGAGTATTTAATGCAGATCCAAGTGTTGGCGGGCGATTCTCTGCCCTAACAGCCTTTGGAATCGTACCATTAG
TGTTGTGCGGAATAGATGTTACTCCGATACTATCTGCAGCGAAGCGGGCCCTTGTTGCACTAAAGGAAGATAGCCAAGCA
AATCCGGCGCTTATACTTGGCGCATTGTTAGCTGTTGAGGGTAAGGCCGCAATTGCTTCCGAAAGCCTTATAGGAAATTG
GATAGAACAATTATTGGCAGAGTCAACAGGTAAAGATTTAACCGGGGTTTTGCCAATTGTTACGAATGGTGACCTGTCTA
AAGTCAGACTGGAAGGTGTGTCGTATTTTGATGTACGGCTAGAAGATGGATCTAGGAATTCTAGCGAGAATTCTAGTGAG
AAAAGTATTCAATCTGAGACAGAGTGTGCGGATAAAGAGTTCTGTGCTCGAATTACTGCGGGGCTTGGCGAACAATTCGT
ATTGTGGGAGTTTGCAACTGCTGTTTTAGGGCATATTCTCTCCATAAACCCCTTTGACCAGCCTGATGTAGAAAAGGCTA
AGGAGGCGACAAGAGGTATTTTAGGCAACTTTAAAAAACCTGAAGATGAGCCCGTTATATCTCTTCAAAACGGTATAAAG
ACCCTTGGAGGTGCCTGTACTCAGAATCTTGGTGAGTTATTAGATACCCTTGGGAGGGCAATCCCGCCCTCCGGGTATCT
TGCGATTCAAGCATATTTAGACCCAAAGAATGACGATGGGGTAATGGATCTTGTCAAGTACATGGTGCTGCGCTATAACA
GGCCTGTTACATTCGGTTGGGGTCCGAGGTTTTTGCATTCAACTGGGCAGTATCACAAGGGTGGCCCCCGAATTGGCAGC
TTCTTGCAACTTGTAACGGATTCTGACAGGTGTTTGGAGATACCGGGCTTGGGTTTTGATTTTGGGAAGTTGATAAGATC
TCAGGCCGCGGGTGATGCGCAGGTTCTAAGGTCCATCGGACGACCTGTTTTGACTCTTTTTGTAAATTCATTAGAAGATC
TGACTTTGAATCTGCCAGGCCTAGAGCCATCTCTATCCAATTGA

Upstream 100 bases:

>100_bases
ACAGACAAGCTTGAAGCTGATGGTGTTAAACAGTTTATAGATTCCTGGAATCAGTTAAAGTCGAATGTGAGGTCCCGCTT
CTGAGCCTTTGCGGCTTGCG

Downstream 100 bases:

>100_bases
ACTGATCGCGCATATGGATTTTAAAACAGAAGTGGAATATAAATGCCAAAGGTGAATTGCGCAACACAGCAGATTGCCCT
GCCTGGGGCGCTTGCTATAT

Product: glucose-6-phosphate isomerase

Products: NA

Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI [H]

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MLRDLSRSWVVLEVLSSEKEKIRCILDTLVDKKIASRISAKDCSVWVESAREEASRRLGWLDVYDHSLPVAQSAKALRND
LLKNGVDRFVLSGMGGSSLASELMSDYFQTSLIVLDTTDPDHVFRVASEPLDRTSLILSSKSGSTLEVDSHRRLFEKHFK
GSGIDPSSRIICITDPNSPLDLLAQEKGYRVFNADPSVGGRFSALTAFGIVPLVLCGIDVTPILSAAKRALVALKEDSQA
NPALILGALLAVEGKAAIASESLIGNWIEQLLAESTGKDLTGVLPIVTNGDLSKVRLEGVSYFDVRLEDGSRNSSENSSE
KSIQSETECADKEFCARITAGLGEQFVLWEFATAVLGHILSINPFDQPDVEKAKEATRGILGNFKKPEDEPVISLQNGIK
TLGGACTQNLGELLDTLGRAIPPSGYLAIQAYLDPKNDDGVMDLVKYMVLRYNRPVTFGWGPRFLHSTGQYHKGGPRIGS
FLQLVTDSDRCLEIPGLGFDFGKLIRSQAAGDAQVLRSIGRPVLTLFVNSLEDLTLNLPGLEPSLSN

Sequences:

>Translated_547_residues
MLRDLSRSWVVLEVLSSEKEKIRCILDTLVDKKIASRISAKDCSVWVESAREEASRRLGWLDVYDHSLPVAQSAKALRND
LLKNGVDRFVLSGMGGSSLASELMSDYFQTSLIVLDTTDPDHVFRVASEPLDRTSLILSSKSGSTLEVDSHRRLFEKHFK
GSGIDPSSRIICITDPNSPLDLLAQEKGYRVFNADPSVGGRFSALTAFGIVPLVLCGIDVTPILSAAKRALVALKEDSQA
NPALILGALLAVEGKAAIASESLIGNWIEQLLAESTGKDLTGVLPIVTNGDLSKVRLEGVSYFDVRLEDGSRNSSENSSE
KSIQSETECADKEFCARITAGLGEQFVLWEFATAVLGHILSINPFDQPDVEKAKEATRGILGNFKKPEDEPVISLQNGIK
TLGGACTQNLGELLDTLGRAIPPSGYLAIQAYLDPKNDDGVMDLVKYMVLRYNRPVTFGWGPRFLHSTGQYHKGGPRIGS
FLQLVTDSDRCLEIPGLGFDFGKLIRSQAAGDAQVLRSIGRPVLTLFVNSLEDLTLNLPGLEPSLSN
>Mature_547_residues
MLRDLSRSWVVLEVLSSEKEKIRCILDTLVDKKIASRISAKDCSVWVESAREEASRRLGWLDVYDHSLPVAQSAKALRND
LLKNGVDRFVLSGMGGSSLASELMSDYFQTSLIVLDTTDPDHVFRVASEPLDRTSLILSSKSGSTLEVDSHRRLFEKHFK
GSGIDPSSRIICITDPNSPLDLLAQEKGYRVFNADPSVGGRFSALTAFGIVPLVLCGIDVTPILSAAKRALVALKEDSQA
NPALILGALLAVEGKAAIASESLIGNWIEQLLAESTGKDLTGVLPIVTNGDLSKVRLEGVSYFDVRLEDGSRNSSENSSE
KSIQSETECADKEFCARITAGLGEQFVLWEFATAVLGHILSINPFDQPDVEKAKEATRGILGNFKKPEDEPVISLQNGIK
TLGGACTQNLGELLDTLGRAIPPSGYLAIQAYLDPKNDDGVMDLVKYMVLRYNRPVTFGWGPRFLHSTGQYHKGGPRIGS
FLQLVTDSDRCLEIPGLGFDFGKLIRSQAAGDAQVLRSIGRPVLTLFVNSLEDLTLNLPGLEPSLSN

Specific function: Unknown

COG id: COG0166

COG function: function code G; Glucose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GPI family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001672
- InterPro:   IPR023096
- InterPro:   IPR018189 [H]

Pfam domain/function: PF00342 PGI [H]

EC number: =5.3.1.9 [H]

Molecular weight: Translated: 59420; Mature: 59420

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRDLSRSWVVLEVLSSEKEKIRCILDTLVDKKIASRISAKDCSVWVESAREEASRRLGW
CCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCC
LDVYDHSLPVAQSAKALRNDLLKNGVDRFVLSGMGGSSLASELMSDYFQTSLIVLDTTDP
EEECCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHCEEEEEECCCH
DHVFRVASEPLDRTSLILSSKSGSTLEVDSHRRLFEKHFKGSGIDPSSRIICITDPNSPL
HHHHHHHCCCCCCHHEEEECCCCCEEEEHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCH
DLLAQEKGYRVFNADPSVGGRFSALTAFGIVPLVLCGIDVTPILSAAKRALVALKEDSQA
HHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
NPALILGALLAVEGKAAIASESLIGNWIEQLLAESTGKDLTGVLPIVTNGDLSKVRLEGV
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECCC
SYFDVRLEDGSRNSSENSSEKSIQSETECADKEFCARITAGLGEQFVLWEFATAVLGHIL
EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
SINPFDQPDVEKAKEATRGILGNFKKPEDEPVISLQNGIKTLGGACTQNLGELLDTLGRA
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHC
IPPSGYLAIQAYLDPKNDDGVMDLVKYMVLRYNRPVTFGWGPRFLHSTGQYHKGGPRIGS
CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEECCCHHHHHCCCCCCCCCCCHHH
FLQLVTDSDRCLEIPGLGFDFGKLIRSQAAGDAQVLRSIGRPVLTLFVNSLEDLTLNLPG
HHHHHCCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCEEECCC
LEPSLSN
CCCCCCC
>Mature Secondary Structure
MLRDLSRSWVVLEVLSSEKEKIRCILDTLVDKKIASRISAKDCSVWVESAREEASRRLGW
CCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCC
LDVYDHSLPVAQSAKALRNDLLKNGVDRFVLSGMGGSSLASELMSDYFQTSLIVLDTTDP
EEECCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHCEEEEEECCCH
DHVFRVASEPLDRTSLILSSKSGSTLEVDSHRRLFEKHFKGSGIDPSSRIICITDPNSPL
HHHHHHHCCCCCCHHEEEECCCCCEEEEHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCH
DLLAQEKGYRVFNADPSVGGRFSALTAFGIVPLVLCGIDVTPILSAAKRALVALKEDSQA
HHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
NPALILGALLAVEGKAAIASESLIGNWIEQLLAESTGKDLTGVLPIVTNGDLSKVRLEGV
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECCC
SYFDVRLEDGSRNSSENSSEKSIQSETECADKEFCARITAGLGEQFVLWEFATAVLGHIL
EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
SINPFDQPDVEKAKEATRGILGNFKKPEDEPVISLQNGIKTLGGACTQNLGELLDTLGRA
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHC
IPPSGYLAIQAYLDPKNDDGVMDLVKYMVLRYNRPVTFGWGPRFLHSTGQYHKGGPRIGS
CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEECCCHHHHHCCCCCCCCCCCHHH
FLQLVTDSDRCLEIPGLGFDFGKLIRSQAAGDAQVLRSIGRPVLTLFVNSLEDLTLNLPG
HHHHHCCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCEEECCC
LEPSLSN
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]