| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is trpE [H]
Identifier: 28572537
GI number: 28572537
Start: 416640
End: 418070
Strand: Direct
Name: trpE [H]
Synonym: TW384
Alternate gene names: 28572537
Gene position: 416640-418070 (Clockwise)
Preceding gene: 28572527
Following gene: 28572538
Centisome position: 45.0
GC content: 43.89
Gene sequence:
>1431_bases GTGGAAGAAGATCGGGGTGTTTTTTGGGTGGATTACCCCGTTGACCTCTCCGAGGATTTTGCTGACAGTTGTTTCCGATA CCTCTTTGAAGCCCTTTTTTACGATTCGGAGAATTGCTTTTGGCTGGATGATGCACGACCACTGCAAAACCGACGACGCA GTGCGATTGGCTCTGGTCCGTCGGTGAGTCTTCGATCTGGGAGCTGTCTTGATCCGACTGATGTGGAGTCTTTTTTCTCA AAGCTCTTGGATTGTGACCCACAGCCTTGGCCATTAGGCTTTGTTGGGTGGATTGATTACGAAGTTGGCGCATGTCTATT GGGTGTAAATTATCCAACACAGCAAGATGCTCCTGCTACAGGTCAAACTAATTTATCCTCGTGGATTTGCTGCAACCGCG CGATATGTATTGACTACAGAATGGGATTGCTGAAAATTATCAGTTTTTCCAAAAATACTGTTGATGCAAAAGAATGGGTA AATAGGGCTTCAACTCTGGTTGAGAAGCTCTTGATGAAAGGTTCAATAGACCGAGAAGATTATATCCCGCAGGCTAAATC AAGGCATTTAGCAAACTCAAAACTCATGCCAAGAAATAGTTTTGCTTCAGGGTTGCAGTGGCTTCATACCGATCAACAAT ATTTGCAACTTATTCACAGAGTTCTGGAAAAAATCATGCGTGGAGATGTTTACCAAATTTGTCTGGCTAACAGACTTACG ATCAGGAACTCCGGTAACAGGTCACCATTTTCTGCCTTTTGGGCCCTTAGACAGAAAAGTCCAACACAGTACTGTGCCTA TATCAAAATCGGACCGCGCCACTTTGTTAGCTCTTCCCCAGAGCTTTTTCTGGCATTATCTGACAATATTCTTGTCACAG AACCGATCAAGGGAACACGCCCAAGGGGTAGGTCTCCTTCCGAGGATTCATATCTGATATCGGAGCTTAAAACTTCTGAA AAAGAGAAAGCCGAAAACCTTATGATTGTCGATCTAATGCGCAATGATTTTAGTAAAATCTGCTCTTCGGTTGAAGTTGA TTATATGTATAGGGTCAGAACATATAAGGGTTTGCATCAGCTTGTATCGAGAGTAAGCGGTATCTTGCGCCCAGGACGTG GATTTTTTGATATTTTGTGTGCAACATTTCCAGCAGGATCAGTGACCGGAGCACCTAAAATCGCAGCCGTCAAGTCTATA TATGATTTGGAAAGGGCAAGAAGGGGAGTTTATTCAGGTGCATTCGGTTATATATCGGGCGATGGAAAGAATATCTGTTT TGCGATGTCTATTAGATCAGCAGTTTTTTGCAATGGAGAAGTCAGTATTGGTAGTGGAGGGGGAGTGGTGTTTGATAGCG ATCCGGAGTTTGAACTTGCCGAGACTAAACTGAAGGTAGCGGCAATGATTGATGCGATTTTGGGTAGGTAG
Upstream 100 bases:
>100_bases GCTATCCCAATTAGGAGCAGTGGGTTAATGCTACTTATAACCTCAAGGAAGGTATGCACGAAGTCGAACACCTACTAAAG TTTAGTAAATGGAGACAATT
Downstream 100 bases:
>100_bases ATACTTTTCATGAAAACCTATAACCGGTTCATCCAAGAACATGCATGCGTTACGTGCCTTAGATACATTGTGTGAGAATA TGGAATACAATTTTCGTGCC
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MEEDRGVFWVDYPVDLSEDFADSCFRYLFEALFYDSENCFWLDDARPLQNRRRSAIGSGPSVSLRSGSCLDPTDVESFFS KLLDCDPQPWPLGFVGWIDYEVGACLLGVNYPTQQDAPATGQTNLSSWICCNRAICIDYRMGLLKIISFSKNTVDAKEWV NRASTLVEKLLMKGSIDREDYIPQAKSRHLANSKLMPRNSFASGLQWLHTDQQYLQLIHRVLEKIMRGDVYQICLANRLT IRNSGNRSPFSAFWALRQKSPTQYCAYIKIGPRHFVSSSPELFLALSDNILVTEPIKGTRPRGRSPSEDSYLISELKTSE KEKAENLMIVDLMRNDFSKICSSVEVDYMYRVRTYKGLHQLVSRVSGILRPGRGFFDILCATFPAGSVTGAPKIAAVKSI YDLERARRGVYSGAFGYISGDGKNICFAMSIRSAVFCNGEVSIGSGGGVVFDSDPEFELAETKLKVAAMIDAILGR
Sequences:
>Translated_476_residues MEEDRGVFWVDYPVDLSEDFADSCFRYLFEALFYDSENCFWLDDARPLQNRRRSAIGSGPSVSLRSGSCLDPTDVESFFS KLLDCDPQPWPLGFVGWIDYEVGACLLGVNYPTQQDAPATGQTNLSSWICCNRAICIDYRMGLLKIISFSKNTVDAKEWV NRASTLVEKLLMKGSIDREDYIPQAKSRHLANSKLMPRNSFASGLQWLHTDQQYLQLIHRVLEKIMRGDVYQICLANRLT IRNSGNRSPFSAFWALRQKSPTQYCAYIKIGPRHFVSSSPELFLALSDNILVTEPIKGTRPRGRSPSEDSYLISELKTSE KEKAENLMIVDLMRNDFSKICSSVEVDYMYRVRTYKGLHQLVSRVSGILRPGRGFFDILCATFPAGSVTGAPKIAAVKSI YDLERARRGVYSGAFGYISGDGKNICFAMSIRSAVFCNGEVSIGSGGGVVFDSDPEFELAETKLKVAAMIDAILGR >Mature_476_residues MEEDRGVFWVDYPVDLSEDFADSCFRYLFEALFYDSENCFWLDDARPLQNRRRSAIGSGPSVSLRSGSCLDPTDVESFFS KLLDCDPQPWPLGFVGWIDYEVGACLLGVNYPTQQDAPATGQTNLSSWICCNRAICIDYRMGLLKIISFSKNTVDAKEWV NRASTLVEKLLMKGSIDREDYIPQAKSRHLANSKLMPRNSFASGLQWLHTDQQYLQLIHRVLEKIMRGDVYQICLANRLT IRNSGNRSPFSAFWALRQKSPTQYCAYIKIGPRHFVSSSPELFLALSDNILVTEPIKGTRPRGRSPSEDSYLISELKTSE KEKAENLMIVDLMRNDFSKICSSVEVDYMYRVRTYKGLHQLVSRVSGILRPGRGFFDILCATFPAGSVTGAPKIAAVKSI YDLERARRGVYSGAFGYISGDGKNICFAMSIRSAVFCNGEVSIGSGGGVVFDSDPEFELAETKLKVAAMIDAILGR
Specific function: Catalyzes The Biosynthesis Of 4-Amino-4-Deoxychorismate (Adc) From Chorismate And Glutamine. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=293, Percent_Identity=36.1774744027304, Blast_Score=174, Evalue=1e-44, Organism=Escherichia coli, GI1787518, Length=277, Percent_Identity=35.0180505415162, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI87082077, Length=266, Percent_Identity=25.9398496240602, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1786809, Length=197, Percent_Identity=24.8730964467005, Blast_Score=66, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6320935, Length=448, Percent_Identity=29.9107142857143, Blast_Score=179, Evalue=8e-46, Organism=Saccharomyces cerevisiae, GI6324361, Length=414, Percent_Identity=26.8115942028986, Blast_Score=117, Evalue=4e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005256 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 53346; Mature: 53346
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEDRGVFWVDYPVDLSEDFADSCFRYLFEALFYDSENCFWLDDARPLQNRRRSAIGSGP CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCC SVSLRSGSCLDPTDVESFFSKLLDCDPQPWPLGFVGWIDYEVGACLLGVNYPTQQDAPAT CEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCC GQTNLSSWICCNRAICIDYRMGLLKIISFSKNTVDAKEWVNRASTLVEKLLMKGSIDRED CCCCCCHHHHCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH YIPQAKSRHLANSKLMPRNSFASGLQWLHTDQQYLQLIHRVLEKIMRGDVYQICLANRLT CCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEHHHHCCEE IRNSGNRSPFSAFWALRQKSPTQYCAYIKIGPRHFVSSSPELFLALSDNILVTEPIKGTR EECCCCCCHHHHHHHHHCCCCCCEEEEEEECCHHHHCCCCCEEEEEECCEEEECCCCCCC PRGRSPSEDSYLISELKTSEKEKAENLMIVDLMRNDFSKICSSVEVDYMYRVRTYKGLHQ CCCCCCCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LVSRVSGILRPGRGFFDILCATFPAGSVTGAPKIAAVKSIYDLERARRGVYSGAFGYISG HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEC DGKNICFAMSIRSAVFCNGEVSIGSGGGVVFDSDPEFELAETKLKVAAMIDAILGR CCCCEEEEEEECCEEEECCEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEEDRGVFWVDYPVDLSEDFADSCFRYLFEALFYDSENCFWLDDARPLQNRRRSAIGSGP CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCC SVSLRSGSCLDPTDVESFFSKLLDCDPQPWPLGFVGWIDYEVGACLLGVNYPTQQDAPAT CEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCC GQTNLSSWICCNRAICIDYRMGLLKIISFSKNTVDAKEWVNRASTLVEKLLMKGSIDRED CCCCCCHHHHCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH YIPQAKSRHLANSKLMPRNSFASGLQWLHTDQQYLQLIHRVLEKIMRGDVYQICLANRLT CCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEHHHHCCEE IRNSGNRSPFSAFWALRQKSPTQYCAYIKIGPRHFVSSSPELFLALSDNILVTEPIKGTR EECCCCCCHHHHHHHHHCCCCCCEEEEEEECCHHHHCCCCCEEEEEECCEEEECCCCCCC PRGRSPSEDSYLISELKTSEKEKAENLMIVDLMRNDFSKICSSVEVDYMYRVRTYKGLHQ CCCCCCCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LVSRVSGILRPGRGFFDILCATFPAGSVTGAPKIAAVKSIYDLERARRGVYSGAFGYISG HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEC DGKNICFAMSIRSAVFCNGEVSIGSGGGVVFDSDPEFELAETKLKVAAMIDAILGR CCCCEEEEEEECCEEEECCEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]