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The map label for this gene is smf [C]

Identifier: 28572469

GI number: 28572469

Start: 347316

End: 348461

Strand: Direct

Name: smf [C]

Synonym: TW314

Alternate gene names: 28572469

Gene position: 347316-348461 (Clockwise)

Preceding gene: 28572468

Following gene: 28572470

Centisome position: 37.51

GC content: 48.25

Gene sequence:

>1146_bases
GTGAAGCCCCTATGTTTTTCTGAGGAGTTGAGCGAAGATCAGGCAGTGGATTACTTTGCTCGTGCAGCATGGAGCTTAAT
TTCTGAGCCGGGTGACCGCATTGCCGGGCGTCTAATAAGCTGCATGACAGCTCCTAGAGCACTGGGTTGGCTGCTTGGTA
ATATCTCCTTGCCGTTTACCCTAGATGAATTTGAATCGCAGCAGCTTGAAAAGCACAGATCTGTCTGGAAAATGCGTGCT
GACTATCAGCAATTGCTGAAATCATTTCAAGCAGCACATCATACGGGTGCAAAACTTGTTGTAACCGATAAGTACAACAA
GCTGCAGGATGAGAAACCCCATATTCTTTGGGTAAAGGGCAACTCCCCGTCTATTTTGCTGGACACGAGTCAAAAGGTCA
GTATTGTTGGCACGCGATGCTGCAGTTACTACGGAAAAAGTGTTACAGCGGACATATCCTACAGTCTTGCCAGAAAGAAT
TATGTAATTGTTTCTGGTGGTGCTCTTGGAATTGACGGGACAGCACATATGTCTGCTCTTTCTGCCGGCAAATCAACGAT
AGTATTTTTTGCGGGAGGGGTGGACTGGATTTACCCAAGAGGTAATGAGGCGCTGTTCTCAAAAATTTGCGAGTCTGGGA
TTATAGTTTCTGAAATGCCTTGCGGCTCCAGACCTACCAAATGGCGCTTTTTGCGCAGGAACAGGCTGATAGCCGCTATT
CCATCTGCTGTTGTCGTAACTGAGGCCGCCGCGCGCTCAGGTAGCATCAGTACAGCGTACCATGCGGCTGATGTTCAGGT
GCCAGTTGGCGCAGTTCCTGGACCTATTAACTCACCCCTATCAGAAGGGTGCAACCGACTTATACGCGACAGGATTGCAG
AAAGTGTTACTTGTGCGGATGATGTGGTTGGATTATTCGCCCCACTCGTTGTTTCACCTATCCAAAAGGACTCTTTTGGG
CTACAGGCTAGTAGAATTAGGGTTATTGATGCTCTGAGTAAAAAGTATGACAGAGATATAAGTGAGATATGCCGCCTGTC
CGGAATGCTCTTTGATGATGTGTCGTCCCTTATGCGTTTGCTTGAACTGTCGGGGCAGGTGATCCGATCAGGTTCCGGCT
GGCGCCTATCAGGTAGGCTTAGATGA

Upstream 100 bases:

>100_bases
TCAGAACATCTGGTCAATATGGTGGGTAGACAAGGAAGGCAATTTATTGAAGAACATTATTAGTACGCTTAATCTGCCAG
ATAGGGAAGTTATATCCGCT

Downstream 100 bases:

>100_bases
AAATTTATGTTGGATAAGGGCTCTCTCAAGAGATCAGTGTGCCCCTGCGGCGACACCCTCAACGAGGGGTTTTGCTGTTT
AATACGCGAGTTTATTATTT

Product: DNA processing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MKPLCFSEELSEDQAVDYFARAAWSLISEPGDRIAGRLISCMTAPRALGWLLGNISLPFTLDEFESQQLEKHRSVWKMRA
DYQQLLKSFQAAHHTGAKLVVTDKYNKLQDEKPHILWVKGNSPSILLDTSQKVSIVGTRCCSYYGKSVTADISYSLARKN
YVIVSGGALGIDGTAHMSALSAGKSTIVFFAGGVDWIYPRGNEALFSKICESGIIVSEMPCGSRPTKWRFLRRNRLIAAI
PSAVVVTEAAARSGSISTAYHAADVQVPVGAVPGPINSPLSEGCNRLIRDRIAESVTCADDVVGLFAPLVVSPIQKDSFG
LQASRIRVIDALSKKYDRDISEICRLSGMLFDDVSSLMRLLELSGQVIRSGSGWRLSGRLR

Sequences:

>Translated_381_residues
MKPLCFSEELSEDQAVDYFARAAWSLISEPGDRIAGRLISCMTAPRALGWLLGNISLPFTLDEFESQQLEKHRSVWKMRA
DYQQLLKSFQAAHHTGAKLVVTDKYNKLQDEKPHILWVKGNSPSILLDTSQKVSIVGTRCCSYYGKSVTADISYSLARKN
YVIVSGGALGIDGTAHMSALSAGKSTIVFFAGGVDWIYPRGNEALFSKICESGIIVSEMPCGSRPTKWRFLRRNRLIAAI
PSAVVVTEAAARSGSISTAYHAADVQVPVGAVPGPINSPLSEGCNRLIRDRIAESVTCADDVVGLFAPLVVSPIQKDSFG
LQASRIRVIDALSKKYDRDISEICRLSGMLFDDVSSLMRLLELSGQVIRSGSGWRLSGRLR
>Mature_381_residues
MKPLCFSEELSEDQAVDYFARAAWSLISEPGDRIAGRLISCMTAPRALGWLLGNISLPFTLDEFESQQLEKHRSVWKMRA
DYQQLLKSFQAAHHTGAKLVVTDKYNKLQDEKPHILWVKGNSPSILLDTSQKVSIVGTRCCSYYGKSVTADISYSLARKN
YVIVSGGALGIDGTAHMSALSAGKSTIVFFAGGVDWIYPRGNEALFSKICESGIIVSEMPCGSRPTKWRFLRRNRLIAAI
PSAVVVTEAAARSGSISTAYHAADVQVPVGAVPGPINSPLSEGCNRLIRDRIAESVTCADDVVGLFAPLVVSPIQKDSFG
LQASRIRVIDALSKKYDRDISEICRLSGMLFDDVSSLMRLLELSGQVIRSGSGWRLSGRLR

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994932, Length=181, Percent_Identity=37.5690607734807, Blast_Score=108, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 41635; Mature: 41635

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLCFSEELSEDQAVDYFARAAWSLISEPGDRIAGRLISCMTAPRALGWLLGNISLPFT
CCCCCCCHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LDEFESQQLEKHRSVWKMRADYQQLLKSFQAAHHTGAKLVVTDKYNKLQDEKPHILWVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCEEEEEC
NSPSILLDTSQKVSIVGTRCCSYYGKSVTADISYSLARKNYVIVSGGALGIDGTAHMSAL
CCCEEEEECCCCEEHHHHHHHHHHCCCEEEHHHHEEHHCCEEEEECCEECCCCHHHHHHH
SAGKSTIVFFAGGVDWIYPRGNEALFSKICESGIIVSEMPCGSRPTKWRFLRRNRLIAAI
HCCCCEEEEEECCCEEEEECCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCEEEEC
PSAVVVTEAAARSGSISTAYHAADVQVPVGAVPGPINSPLSEGCNRLIRDRIAESVTCAD
CCHHHHHHHHHCCCCCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DVVGLFAPLVVSPIQKDSFGLQASRIRVIDALSKKYDRDISEICRLSGMLFDDVSSLMRL
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHH
LELSGQVIRSGSGWRLSGRLR
HHHCCHHEECCCCEEECCCCC
>Mature Secondary Structure
MKPLCFSEELSEDQAVDYFARAAWSLISEPGDRIAGRLISCMTAPRALGWLLGNISLPFT
CCCCCCCHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LDEFESQQLEKHRSVWKMRADYQQLLKSFQAAHHTGAKLVVTDKYNKLQDEKPHILWVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCEEEEEC
NSPSILLDTSQKVSIVGTRCCSYYGKSVTADISYSLARKNYVIVSGGALGIDGTAHMSAL
CCCEEEEECCCCEEHHHHHHHHHHCCCEEEHHHHEEHHCCEEEEECCEECCCCHHHHHHH
SAGKSTIVFFAGGVDWIYPRGNEALFSKICESGIIVSEMPCGSRPTKWRFLRRNRLIAAI
HCCCCEEEEEECCCEEEEECCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCEEEEC
PSAVVVTEAAARSGSISTAYHAADVQVPVGAVPGPINSPLSEGCNRLIRDRIAESVTCAD
CCHHHHHHHHHCCCCCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DVVGLFAPLVVSPIQKDSFGLQASRIRVIDALSKKYDRDISEICRLSGMLFDDVSSLMRL
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHH
LELSGQVIRSGSGWRLSGRLR
HHHCCHHEECCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]