Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is mgtE [H]

Identifier: 28572397

GI number: 28572397

Start: 261095

End: 262342

Strand: Reverse

Name: mgtE [H]

Synonym: TW237

Alternate gene names: 28572397

Gene position: 262342-261095 (Counterclockwise)

Preceding gene: 28572398

Following gene: 28572396

Centisome position: 28.33

GC content: 46.47

Gene sequence:

>1248_bases
ATGAGTAAAAGTGTTTATATCTCAAGGGTCTGTGGCAGTTCGGTCCTCGGGCCAACAGGTGACAGATTGGGAAAGGTCAA
AGATGTGTTGGGCACTCCGAGGCTTAGAAAATCCCCTCGAATAATCGGTATGGTCCTTGAAATCGTGGGAAAGCGCTACA
TATTTGTTTCGATCAACCGAGTCACCGCAATAGACAACGGATACGTCGCAACTCGTGGGGTAATCAATATTCAGAGGTTC
AGGCGTAGATCGGGTGAGATATGCCTTTCCCAAGACATCGTCGGTAAAAAAGTCAGTATTGGAAATAACACAACTGCAAG
GGCTGAAGATATAGAGATACTTGCAGACCCGGCAGGCGAATGGTATGTCGGAAAGATATTTGTTAGAACCTCGGGAAATA
GGCTATTTTCCAGGGGAAATACCTGCTTTATGCACTGGCAGGATATCTCGGGACTTGATCAAGTACCCGACTATATATCT
AACCCAGAAATAAAGGCTGCTGACTTGGCGGCAGATATTGTAGACATGCCTTCAACTGATGCTGCCAGGATTGTTGAAGA
TCTTCCGGATGAGCGACTTGCCGACGTTCTGGAAGAGATGGAAGAGCCGGAGCAGGCAAAGATTATAGACGCCCTTGACG
ATAATCGCACAGCAGATATTTTGGAAGAGATGCAGCCTGATGATGCTGTGGACCTAATAGGCTATATGTCAAACAAAAGA
AAAGAAGGCCTCTTACAACTCATGGAGCCGGAAGAGGCAAGAAAACTTAGGCTTCTTCTCGGTTTTGCGCATAATACAGC
AGGCGGCATGATGACCTCTGATTTTGTAATCGTCTCACCGGACACAACGGTTGCCGAAGCCCTAGCCTTGATAAGGCGCC
AAGAGATCGCACCAGCCCTTGCATCAACAGTCTGTGTGGCATTACCACCCTATGACCCACCGACCGGGAGGTTCATAGGG
GTTGTCCACTTCCAGGCCTTACTGAGACAGCCACCGTATCAGAAACTCTCTCATATAATTGACACGTCTATCGAGCCCGT
TCTGCCAACAATTGATGCAGAAAAGGTAAGTAGGATTTTGGCGACCTATAACCTGCTCTCGCTTCCGGTAATCGATGACC
GCAAAAGGTTGCTCGGAATAATAACCATTGATGATGTTCTGGACTACGTGTTACCAAAAAATTGGCGTAAAAATGAAATC
GACAGTACCAACAATAAAGAGAATATGGTTCACAATGAAAAAGAGTAG

Upstream 100 bases:

>100_bases
TCGAAGATAACATACTCATAGCCTCAGATGGCCCTGTAAATATGTCGCGTGATATACCAAGGGCCCGAATTGATGTGGAA
CAGTGGATTCAACAAGCATC

Downstream 100 bases:

>100_bases
CAAGTTACACACTCCGCTTTTAACATCGCGCATGAGGTTGAGGTATAACCCTGGTGTTTTTGAAATGCGAACCGAGAGGA
TTGCGCTCTATATGGGCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MSKSVYISRVCGSSVLGPTGDRLGKVKDVLGTPRLRKSPRIIGMVLEIVGKRYIFVSINRVTAIDNGYVATRGVINIQRF
RRRSGEICLSQDIVGKKVSIGNNTTARAEDIEILADPAGEWYVGKIFVRTSGNRLFSRGNTCFMHWQDISGLDQVPDYIS
NPEIKAADLAADIVDMPSTDAARIVEDLPDERLADVLEEMEEPEQAKIIDALDDNRTADILEEMQPDDAVDLIGYMSNKR
KEGLLQLMEPEEARKLRLLLGFAHNTAGGMMTSDFVIVSPDTTVAEALALIRRQEIAPALASTVCVALPPYDPPTGRFIG
VVHFQALLRQPPYQKLSHIIDTSIEPVLPTIDAEKVSRILATYNLLSLPVIDDRKRLLGIITIDDVLDYVLPKNWRKNEI
DSTNNKENMVHNEKE

Sequences:

>Translated_415_residues
MSKSVYISRVCGSSVLGPTGDRLGKVKDVLGTPRLRKSPRIIGMVLEIVGKRYIFVSINRVTAIDNGYVATRGVINIQRF
RRRSGEICLSQDIVGKKVSIGNNTTARAEDIEILADPAGEWYVGKIFVRTSGNRLFSRGNTCFMHWQDISGLDQVPDYIS
NPEIKAADLAADIVDMPSTDAARIVEDLPDERLADVLEEMEEPEQAKIIDALDDNRTADILEEMQPDDAVDLIGYMSNKR
KEGLLQLMEPEEARKLRLLLGFAHNTAGGMMTSDFVIVSPDTTVAEALALIRRQEIAPALASTVCVALPPYDPPTGRFIG
VVHFQALLRQPPYQKLSHIIDTSIEPVLPTIDAEKVSRILATYNLLSLPVIDDRKRLLGIITIDDVLDYVLPKNWRKNEI
DSTNNKENMVHNEKE
>Mature_414_residues
SKSVYISRVCGSSVLGPTGDRLGKVKDVLGTPRLRKSPRIIGMVLEIVGKRYIFVSINRVTAIDNGYVATRGVINIQRFR
RRSGEICLSQDIVGKKVSIGNNTTARAEDIEILADPAGEWYVGKIFVRTSGNRLFSRGNTCFMHWQDISGLDQVPDYISN
PEIKAADLAADIVDMPSTDAARIVEDLPDERLADVLEEMEEPEQAKIIDALDDNRTADILEEMQPDDAVDLIGYMSNKRK
EGLLQLMEPEEARKLRLLLGFAHNTAGGMMTSDFVIVSPDTTVAEALALIRRQEIAPALASTVCVALPPYDPPTGRFIGV
VHFQALLRQPPYQKLSHIIDTSIEPVLPTIDAEKVSRILATYNLLSLPVIDDRKRLLGIITIDDVLDYVLPKNWRKNEID
STNNKENMVHNEKE

Specific function: Acts as a magnesium transporter [H]

COG id: COG2239

COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR006668
- InterPro:   IPR006667
- InterPro:   IPR006669 [H]

Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]

EC number: NA

Molecular weight: Translated: 46177; Mature: 46045

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSVYISRVCGSSVLGPTGDRLGKVKDVLGTPRLRKSPRIIGMVLEIVGKRYIFVSINR
CCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEEEEE
VTAIDNGYVATRGVINIQRFRRRSGEICLSQDIVGKKVSIGNNTTARAEDIEILADPAGE
EEEECCCEEEECCHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCCCCCCEEEEECCCCC
WYVGKIFVRTSGNRLFSRGNTCFMHWQDISGLDQVPDYISNPEIKAADLAADIVDMPSTD
EEEEEEEEEECCCEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
AARIVEDLPDERLADVLEEMEEPEQAKIIDALDDNRTADILEEMQPDDAVDLIGYMSNKR
HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHCCH
KEGLLQLMEPEEARKLRLLLGFAHNTAGGMMTSDFVIVSPDTTVAEALALIRRQEIAPAL
HHHHHHHCCCHHHHHEEHHEEEHHCCCCCCEECCEEEECCCHHHHHHHHHHHHHHHHHHH
ASTVCVALPPYDPPTGRFIGVVHFQALLRQPPYQKLSHIIDTSIEPVLPTIDAEKVSRIL
HHCEEEEECCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHH
ATYNLLSLPVIDDRKRLLGIITIDDVLDYVLPKNWRKNEIDSTNNKENMVHNEKE
HHHHHHCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure 
SKSVYISRVCGSSVLGPTGDRLGKVKDVLGTPRLRKSPRIIGMVLEIVGKRYIFVSINR
CCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEEEEE
VTAIDNGYVATRGVINIQRFRRRSGEICLSQDIVGKKVSIGNNTTARAEDIEILADPAGE
EEEECCCEEEECCHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCCCCCCEEEEECCCCC
WYVGKIFVRTSGNRLFSRGNTCFMHWQDISGLDQVPDYISNPEIKAADLAADIVDMPSTD
EEEEEEEEEECCCEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
AARIVEDLPDERLADVLEEMEEPEQAKIIDALDDNRTADILEEMQPDDAVDLIGYMSNKR
HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHCCH
KEGLLQLMEPEEARKLRLLLGFAHNTAGGMMTSDFVIVSPDTTVAEALALIRRQEIAPAL
HHHHHHHCCCHHHHHEEHHEEEHHCCCCCCEECCEEEECCCHHHHHHHHHHHHHHHHHHH
ASTVCVALPPYDPPTGRFIGVVHFQALLRQPPYQKLSHIIDTSIEPVLPTIDAEKVSRIL
HHCEEEEECCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHH
ATYNLLSLPVIDDRKRLLGIITIDDVLDYVLPKNWRKNEIDSTNNKENMVHNEKE
HHHHHHCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]