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The map label for this gene is 28572396

Identifier: 28572396

GI number: 28572396

Start: 260614

End: 261108

Strand: Reverse

Name: 28572396

Synonym: TW236

Alternate gene names: NA

Gene position: 261108-260614 (Counterclockwise)

Preceding gene: 28572397

Following gene: 28572395

Centisome position: 28.2

GC content: 43.03

Gene sequence:

>495_bases
ATGAAAAAGAGTAGCAAGTTACACACTCCGCTTTTAACATCGCGCATGAGGTTGAGGTATAACCCTGGTGTTTTTGAAAT
GCGAACCGAGAGGATTGCGCTCTATATGGGCACAGCCTCATTCTTCATTTTTTTCACAACATTTTGTATTCTCTGGATTC
TTTGGAGTAACTATGCTCCAAACGGTCTTAGATTTGACAGTGCAGAAATTGGATATCCGGTTCTAACACTTGTTCTTTCT
GTGCTAGCTGCGTACGCAGCACCATTGATCCTTTTGGCAGAAATTAGACAGTGGAAGCGTGAAAGTCTGAACATGAAACA
AATGCGCGAAATGGCCGACCGGAATATTGCCAGCACAGAATATCTGGCGCGTGAAGTTGCCGATTTAAGGTTATCAATAG
CACAGCTAATTACAGATCAACAGAAAAACAATAACCGACTGAAGCGCCTTGAGGAGACAGAAAAAACCATACAGGACTTC
GGGAACGATTCCTGA

Upstream 100 bases:

>100_bases
GGAATAATAACCATTGATGATGTTCTGGACTACGTGTTACCAAAAAATTGGCGTAAAAATGAAATCGACAGTACCAACAA
TAAAGAGAATATGGTTCACA

Downstream 100 bases:

>100_bases
AAAGTTTGTGATAGAAAAAAAACTCTATTCCGCGATGGAGAAGGTGTATGATCCTGAGCTCCACATACCAATCACACGCC
TCGGGATGGTAAAAACCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKKSSKLHTPLLTSRMRLRYNPGVFEMRTERIALYMGTASFFIFFTTFCILWILWSNYAPNGLRFDSAEIGYPVLTLVLS
VLAAYAAPLILLAEIRQWKRESLNMKQMREMADRNIASTEYLAREVADLRLSIAQLITDQQKNNNRLKRLEETEKTIQDF
GNDS

Sequences:

>Translated_164_residues
MKKSSKLHTPLLTSRMRLRYNPGVFEMRTERIALYMGTASFFIFFTTFCILWILWSNYAPNGLRFDSAEIGYPVLTLVLS
VLAAYAAPLILLAEIRQWKRESLNMKQMREMADRNIASTEYLAREVADLRLSIAQLITDQQKNNNRLKRLEETEKTIQDF
GNDS
>Mature_164_residues
MKKSSKLHTPLLTSRMRLRYNPGVFEMRTERIALYMGTASFFIFFTTFCILWILWSNYAPNGLRFDSAEIGYPVLTLVLS
VLAAYAAPLILLAEIRQWKRESLNMKQMREMADRNIASTEYLAREVADLRLSIAQLITDQQKNNNRLKRLEETEKTIQDF
GNDS

Specific function: Unknown

COG id: COG4420

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19076; Mature: 19076

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSSKLHTPLLTSRMRLRYNPGVFEMRTERIALYMGTASFFIFFTTFCILWILWSNYAP
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NGLRFDSAEIGYPVLTLVLSVLAAYAAPLILLAEIRQWKRESLNMKQMREMADRNIASTE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHH
YLAREVADLRLSIAQLITDQQKNNNRLKRLEETEKTIQDFGNDS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKSSKLHTPLLTSRMRLRYNPGVFEMRTERIALYMGTASFFIFFTTFCILWILWSNYAP
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NGLRFDSAEIGYPVLTLVLSVLAAYAAPLILLAEIRQWKRESLNMKQMREMADRNIASTE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHH
YLAREVADLRLSIAQLITDQQKNNNRLKRLEETEKTIQDFGNDS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA