| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27365239
Identifier: 27365239
GI number: 27365239
Start: 1886492
End: 1887169
Strand: Reverse
Name: 27365239
Synonym: VV1_1892
Alternate gene names: NA
Gene position: 1887169-1886492 (Counterclockwise)
Preceding gene: 27365240
Following gene: 27365238
Centisome position: 57.5
GC content: 44.69
Gene sequence:
>678_bases ATGAGTAAGTTTTCTGATTATTATGTAGTTTACCAGCGTGTAGGCGAGCACGCCATGGTGTTAGTCGGGCATGAAAATGA TGTTCCACGAGACCTGACGGGTAATGACTTCCAGGAAGACACCAACCGCTGGTTTTACTTTGAAAATGGCTTTAGGGATG AAGATGTAAGTCAGGGGATACACCACCAGTTGTGTAACTTACATATGTCCGGCAGAAACATGATGGTGAAACGCGAGCTG TATCTGGCACTGCGCCATATCGAAATCGCCGGAGCGCAATGGCTGAGAGCCGTTATCATCAATGACGATGACACTTACCA CGATGATTACCACTACCTGAATTTTTTTCGAAATCCTGTAGACCGAGATTACGCCTATTACGATTTCGTTGATTTTGAGC AGAGCGAGTACGAGAAAGATGTCTTTGCTGATTACCTGCCCCCGCTCTACACCTTCGAAAAAATCGTCTTATCACCAGAA AAACTCGCTGCCGTGCCCTTGGAAAAACGCTTAATTTGGGATGACTTGCAGTTTACTGACCGACTTGTTGTACATAAATC CGTTAAAGAAATCATGGAAAAATACCAACCTCTCGACTGTCGTTTTACTCGGATAGAGGAACATAAAGAGAACATGGGTA CTCGCGCAGAATACGACGCCGATGGGAATCTAATATGA
Upstream 100 bases:
>100_bases TTTAAACGCCCTGAATTAAGCAAAGAACATGCGATTTGGAACAACCGAGTGATCACCTGGCCCAAAGGTGATAAATGGAC ATTAAAGCAAGGAATCTGAT
Downstream 100 bases:
>100_bases ATAAGTTTTCTGATTATTATGTGGTTTACCAGCGCGTGGGCGAGCACGCTATGGTTTTGACTGGTCATGAGAAAAATGCA GGAGCTGATCTTACGTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MSKFSDYYVVYQRVGEHAMVLVGHENDVPRDLTGNDFQEDTNRWFYFENGFRDEDVSQGIHHQLCNLHMSGRNMMVKREL YLALRHIEIAGAQWLRAVIINDDDTYHDDYHYLNFFRNPVDRDYAYYDFVDFEQSEYEKDVFADYLPPLYTFEKIVLSPE KLAAVPLEKRLIWDDLQFTDRLVVHKSVKEIMEKYQPLDCRFTRIEEHKENMGTRAEYDADGNLI
Sequences:
>Translated_225_residues MSKFSDYYVVYQRVGEHAMVLVGHENDVPRDLTGNDFQEDTNRWFYFENGFRDEDVSQGIHHQLCNLHMSGRNMMVKREL YLALRHIEIAGAQWLRAVIINDDDTYHDDYHYLNFFRNPVDRDYAYYDFVDFEQSEYEKDVFADYLPPLYTFEKIVLSPE KLAAVPLEKRLIWDDLQFTDRLVVHKSVKEIMEKYQPLDCRFTRIEEHKENMGTRAEYDADGNLI >Mature_224_residues SKFSDYYVVYQRVGEHAMVLVGHENDVPRDLTGNDFQEDTNRWFYFENGFRDEDVSQGIHHQLCNLHMSGRNMMVKRELY LALRHIEIAGAQWLRAVIINDDDTYHDDYHYLNFFRNPVDRDYAYYDFVDFEQSEYEKDVFADYLPPLYTFEKIVLSPEK LAAVPLEKRLIWDDLQFTDRLVVHKSVKEIMEKYQPLDCRFTRIEEHKENMGTRAEYDADGNLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26976; Mature: 26845
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFSDYYVVYQRVGEHAMVLVGHENDVPRDLTGNDFQEDTNRWFYFENGFRDEDVSQGI CCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHH HHQLCNLHMSGRNMMVKRELYLALRHIEIAGAQWLRAVIINDDDTYHDDYHYLNFFRNPV HHHHHHEEECCCCEEHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCC DRDYAYYDFVDFEQSEYEKDVFADYLPPLYTFEKIVLSPEKLAAVPLEKRLIWDDLQFTD CCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCHHHHHHHCCHHHHH RLVVHKSVKEIMEKYQPLDCRFTRIEEHKENMGTRAEYDADGNLI HHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SKFSDYYVVYQRVGEHAMVLVGHENDVPRDLTGNDFQEDTNRWFYFENGFRDEDVSQGI CCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHH HHQLCNLHMSGRNMMVKRELYLALRHIEIAGAQWLRAVIINDDDTYHDDYHYLNFFRNPV HHHHHHEEECCCCEEHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCC DRDYAYYDFVDFEQSEYEKDVFADYLPPLYTFEKIVLSPEKLAAVPLEKRLIWDDLQFTD CCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCHHHHHHHCCHHHHH RLVVHKSVKEIMEKYQPLDCRFTRIEEHKENMGTRAEYDADGNLI HHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA