| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
Click here to switch to the map view.
The map label for this gene is 27365238
Identifier: 27365238
GI number: 27365238
Start: 1885815
End: 1886495
Strand: Reverse
Name: 27365238
Synonym: VV1_1891
Alternate gene names: NA
Gene position: 1886495-1885815 (Counterclockwise)
Preceding gene: 27365239
Following gene: 27365233
Centisome position: 57.48
GC content: 43.76
Gene sequence:
>681_bases ATGAATAAGTTTTCTGATTATTATGTGGTTTACCAGCGCGTGGGCGAGCACGCTATGGTTTTGACTGGTCATGAGAAAAA TGCAGGAGCTGATCTTACGTTTAATCAGTTTCAAGAAAACACCAACCGCTGGTTCTACTTTGAAAACGGCTTTAGGGATG AAGATGTAAGTCAGGGGATTCACCACCAGTTGTGTAACTTACATATGTCCGGCAGAAACATGATGGTGAAACGCGAGCTG TATCTGGCACTGCGCCATATCGATATCACCGGAGCGCAATGGCTGAGAGCCGTTATCATCAATGACGATGACACTTACCA CGATGATTACCACTACCTGAATTTTTTCCGAAATCCTGTAGACCGAGATTATGCCTATTACGATTTCGTTGATTTTGACC AGAGCGAGTACGAAAAAGATGTCTTTGCCGACTACCTGCCTCCGCTCTACACCTTCGAAAAAATCGTCTTATCACCAGAA AAACTCGCTGCCGTGCCCTTGGAAAAACGCTTGATTTGGGATGACTTGCAGTTTACGGATTGCCTCGTCGTACATAAATC CGTTAAAGAAATCATGGAAAAATACCAACCTCTTGATTGTCGTTTTACCCGAATTGAAGAATATCAAGAAGATATGGGCA CTCGCGCTGAATACGACGCCGATGGGAATCTGATATGTTAA
Upstream 100 bases:
>100_bases TGGAAAAATACCAACCTCTCGACTGTCGTTTTACTCGGATAGAGGAACATAAAGAGAACATGGGTACTCGCGCAGAATAC GACGCCGATGGGAATCTAAT
Downstream 100 bases:
>100_bases AAAGCCATTGCTCAATAATATGCCCGTCGAAAAGACACACTGAATAGCAATGGCTTCAGTCAACCTTGGTCTTACAAAAA TCAAATAACACTATTTGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MNKFSDYYVVYQRVGEHAMVLTGHEKNAGADLTFNQFQENTNRWFYFENGFRDEDVSQGIHHQLCNLHMSGRNMMVKREL YLALRHIDITGAQWLRAVIINDDDTYHDDYHYLNFFRNPVDRDYAYYDFVDFDQSEYEKDVFADYLPPLYTFEKIVLSPE KLAAVPLEKRLIWDDLQFTDCLVVHKSVKEIMEKYQPLDCRFTRIEEYQEDMGTRAEYDADGNLIC
Sequences:
>Translated_226_residues MNKFSDYYVVYQRVGEHAMVLTGHEKNAGADLTFNQFQENTNRWFYFENGFRDEDVSQGIHHQLCNLHMSGRNMMVKREL YLALRHIDITGAQWLRAVIINDDDTYHDDYHYLNFFRNPVDRDYAYYDFVDFDQSEYEKDVFADYLPPLYTFEKIVLSPE KLAAVPLEKRLIWDDLQFTDCLVVHKSVKEIMEKYQPLDCRFTRIEEYQEDMGTRAEYDADGNLIC >Mature_226_residues MNKFSDYYVVYQRVGEHAMVLTGHEKNAGADLTFNQFQENTNRWFYFENGFRDEDVSQGIHHQLCNLHMSGRNMMVKREL YLALRHIDITGAQWLRAVIINDDDTYHDDYHYLNFFRNPVDRDYAYYDFVDFDQSEYEKDVFADYLPPLYTFEKIVLSPE KLAAVPLEKRLIWDDLQFTDCLVVHKSVKEIMEKYQPLDCRFTRIEEYQEDMGTRAEYDADGNLIC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27047; Mature: 27047
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKFSDYYVVYQRVGEHAMVLTGHEKNAGADLTFNQFQENTNRWFYFENGFRDEDVSQGI CCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCHHHHHH HHQLCNLHMSGRNMMVKRELYLALRHIDITGAQWLRAVIINDDDTYHDDYHYLNFFRNPV HHHHHHEEECCCCEEHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCHHHHHHHCCCC DRDYAYYDFVDFDQSEYEKDVFADYLPPLYTFEKIVLSPEKLAAVPLEKRLIWDDLQFTD CCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCHHHHHHHCCCCHHH CLVVHKSVKEIMEKYQPLDCRFTRIEEYQEDMGTRAEYDADGNLIC HHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNKFSDYYVVYQRVGEHAMVLTGHEKNAGADLTFNQFQENTNRWFYFENGFRDEDVSQGI CCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCHHHHHH HHQLCNLHMSGRNMMVKRELYLALRHIDITGAQWLRAVIINDDDTYHDDYHYLNFFRNPV HHHHHHEEECCCCEEHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCHHHHHHHCCCC DRDYAYYDFVDFDQSEYEKDVFADYLPPLYTFEKIVLSPEKLAAVPLEKRLIWDDLQFTD CCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCHHHHHHHCCCCHHH CLVVHKSVKEIMEKYQPLDCRFTRIEEYQEDMGTRAEYDADGNLIC HHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA