Click here to switch to the map view.

The map label for this gene is 27365240

Identifier: 27365240

GI number: 27365240

Start: 1887171

End: 1888028

Strand: Reverse

Name: 27365240

Synonym: VV1_1893

Alternate gene names: NA

Gene position: 1888028-1887171 (Counterclockwise)

Preceding gene: 326423904

Following gene: 27365239

Centisome position: 57.53

GC content: 46.62

Gene sequence:

>858_bases
ATGCGTAATATTAAACCGAGCGGAACAAACTCACCCTCGCCATCGTTAGGCAACCCAAGCTCGGATGACTCAGAATCACC
ACAAACATTGGGCAACTTAGAAAAAATGGACTACCGACAACGGTGGATTGCCAATGTCAGGTCTAAGTACAACTGGAAAC
TGGCCAGCGAAGCAGAAGCCATGCTGCGCCCCGCGCATAAACGCTCGCAGATCGCGAATCGCTGGTATGTGGATGGCGAG
CCTCACCCCTATTTTCTGGGCATTCATATGGAGACCCATCACTTAATCTCATCTAAAGGGGCGCATTTGGATAAACGCAA
TGCTCAAAAGTTAGTCAACGCTGGATATATCATCGACACCCTCGACAACTTAGTCGGCTTGCCCGCAACCTTGCCAGGGG
CGTGCCATTTAGGCTTGCAAGCACACCGAGGCGAACACCCAGACAAGCCCGTAGAAAGTAAGGCCTATCACACCACCGTA
AAAAATGAACTTGAAAAGGTCAAAGAACATTTAAAACGATGTCCCCCTAACACAAAAGCAAGCGATAAAACACCTAATAT
CGACGATATCACAAACAAAATAAGCAAACGTTTATTGGATCAAATCATATCTTGTGAAGTGGCTCTTACCAATATCCCCA
ACAATTTTTCTTCATACGTGGGATGCCGAGGCCAAACCAACATTACAAAAGCTCGAGAAACCAGTGAACGCTGCCCCGTT
GGCTGCAACCATTTTGGCCAAACCGACCGAAAGTACAACTTTAAACGCCCTGAATTAAGCAAAGAACATGCGATTTGGAA
CAACCGAGTGATCACCTGGCCCAAAGGTGATAAATGGACATTAAAGCAAGGAATCTGA

Upstream 100 bases:

>100_bases
AGCGTTTCGACGCCAAAACGTGATGACAAACCACCAAGATGTCGCGTGTGCGGAAAAACAGGCCACGATACTAAGCCCGT
CAGAGCCGGGAGATTAAATT

Downstream 100 bases:

>100_bases
TATGAGTAAGTTTTCTGATTATTATGTAGTTTACCAGCGTGTAGGCGAGCACGCCATGGTGTTAGTCGGGCATGAAAATG
ATGTTCCACGAGACCTGACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MRNIKPSGTNSPSPSLGNPSSDDSESPQTLGNLEKMDYRQRWIANVRSKYNWKLASEAEAMLRPAHKRSQIANRWYVDGE
PHPYFLGIHMETHHLISSKGAHLDKRNAQKLVNAGYIIDTLDNLVGLPATLPGACHLGLQAHRGEHPDKPVESKAYHTTV
KNELEKVKEHLKRCPPNTKASDKTPNIDDITNKISKRLLDQIISCEVALTNIPNNFSSYVGCRGQTNITKARETSERCPV
GCNHFGQTDRKYNFKRPELSKEHAIWNNRVITWPKGDKWTLKQGI

Sequences:

>Translated_285_residues
MRNIKPSGTNSPSPSLGNPSSDDSESPQTLGNLEKMDYRQRWIANVRSKYNWKLASEAEAMLRPAHKRSQIANRWYVDGE
PHPYFLGIHMETHHLISSKGAHLDKRNAQKLVNAGYIIDTLDNLVGLPATLPGACHLGLQAHRGEHPDKPVESKAYHTTV
KNELEKVKEHLKRCPPNTKASDKTPNIDDITNKISKRLLDQIISCEVALTNIPNNFSSYVGCRGQTNITKARETSERCPV
GCNHFGQTDRKYNFKRPELSKEHAIWNNRVITWPKGDKWTLKQGI
>Mature_285_residues
MRNIKPSGTNSPSPSLGNPSSDDSESPQTLGNLEKMDYRQRWIANVRSKYNWKLASEAEAMLRPAHKRSQIANRWYVDGE
PHPYFLGIHMETHHLISSKGAHLDKRNAQKLVNAGYIIDTLDNLVGLPATLPGACHLGLQAHRGEHPDKPVESKAYHTTV
KNELEKVKEHLKRCPPNTKASDKTPNIDDITNKISKRLLDQIISCEVALTNIPNNFSSYVGCRGQTNITKARETSERCPV
GCNHFGQTDRKYNFKRPELSKEHAIWNNRVITWPKGDKWTLKQGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32231; Mature: 32231

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNIKPSGTNSPSPSLGNPSSDDSESPQTLGNLEKMDYRQRWIANVRSKYNWKLASEAEA
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
MLRPAHKRSQIANRWYVDGEPHPYFLGIHMETHHLISSKGAHLDKRNAQKLVNAGYIIDT
HHCCHHHHHHHHHCCEECCCCCCEEEEEEEHHHHHHHCCCCCCCHHHHHHHHHCCHHHHH
LDNLVGLPATLPGACHLGLQAHRGEHPDKPVESKAYHTTVKNELEKVKEHLKRCPPNTKA
HHHHHCCCCCCCCHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SDKTPNIDDITNKISKRLLDQIISCEVALTNIPNNFSSYVGCRGQTNITKARETSERCPV
CCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHCCCCCCCCCHHHHHHHCCCCC
GCNHFGQTDRKYNFKRPELSKEHAIWNNRVITWPKGDKWTLKQGI
CCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MRNIKPSGTNSPSPSLGNPSSDDSESPQTLGNLEKMDYRQRWIANVRSKYNWKLASEAEA
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
MLRPAHKRSQIANRWYVDGEPHPYFLGIHMETHHLISSKGAHLDKRNAQKLVNAGYIIDT
HHCCHHHHHHHHHCCEECCCCCCEEEEEEEHHHHHHHCCCCCCCHHHHHHHHHCCHHHHH
LDNLVGLPATLPGACHLGLQAHRGEHPDKPVESKAYHTTVKNELEKVKEHLKRCPPNTKA
HHHHHCCCCCCCCHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SDKTPNIDDITNKISKRLLDQIISCEVALTNIPNNFSSYVGCRGQTNITKARETSERCPV
CCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHCCCCCCCCCHHHHHHHCCCCC
GCNHFGQTDRKYNFKRPELSKEHAIWNNRVITWPKGDKWTLKQGI
CCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA