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The map label for this gene is yggT [C]

Identifier: 27364894

GI number: 27364894

Start: 1496567

End: 1497124

Strand: Reverse

Name: yggT [C]

Synonym: VV1_1523

Alternate gene names: 27364894

Gene position: 1497124-1496567 (Counterclockwise)

Preceding gene: 27364895

Following gene: 27364893

Centisome position: 45.62

GC content: 49.46

Gene sequence:

>558_bases
ATGAATGCAATGAGTTTTCTGATTTCGACGCTGTTTGATCTCTATATCATGGTCGTGATCTTACGAATTTGGCTGCAAGC
CGCGCGTGCGGATTTTTACAATCCATTTTCGCAGTTTATCGTCAAAGCAACCCAACCCGTAATTGGCCCGCTGCGCCGTG
TGATCCCATCGATTGGCAGTATCGATCTCGCCACTGTGCTGTTTGCCTACGTCTTATGTGTGTTGAAGTTTGTTGCGCTG
ATCCTAATTGCGTCTAGTGGTTCCGTCACCTTTAGTGCCGATTTCCTCTACCTTGGCCTACTGTCACTGGTGAAAGCCGC
AGGTGGTCTGTTGTTCTGGGTACTGTTGATTCGTGCGATTCTGAGCTGGGTGAGCCAAGGTCGCAGCCCTATCGAATACG
TGTTCCATCAATTAACAGAACCTATGCTGGCACCGATTCGTCGTATTTTGCCCGCCATGGGGGGCTTTGACTTAAGCGTG
CTGGTGCTGTTCATCGCTCTGCAATTTGCCAACTTCCTGATGGGCGATGTGATTGGCCCGATTTGGTATCAGTTGTAA

Upstream 100 bases:

>100_bases
TAGCCAAAGCCATGCAAGCGGCAGTGGCTCGCGCGCAAGAGATGGAAAAACTGTTTTAATCACCTGGCTGCTTAGCAGCT
CTACGTTTTAAGGGGCATCT

Downstream 100 bases:

>100_bases
TGAGCCAAACGGTTTGGCTTGATGGTGAGGATGTAGTGCTTCGTCTCTACATCCAACCCAAAGCAAGTCGTGATAAAATC
CTTGGCTTGCATGGTGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MNAMSFLISTLFDLYIMVVILRIWLQAARADFYNPFSQFIVKATQPVIGPLRRVIPSIGSIDLATVLFAYVLCVLKFVAL
ILIASSGSVTFSADFLYLGLLSLVKAAGGLLFWVLLIRAILSWVSQGRSPIEYVFHQLTEPMLAPIRRILPAMGGFDLSV
LVLFIALQFANFLMGDVIGPIWYQL

Sequences:

>Translated_185_residues
MNAMSFLISTLFDLYIMVVILRIWLQAARADFYNPFSQFIVKATQPVIGPLRRVIPSIGSIDLATVLFAYVLCVLKFVAL
ILIASSGSVTFSADFLYLGLLSLVKAAGGLLFWVLLIRAILSWVSQGRSPIEYVFHQLTEPMLAPIRRILPAMGGFDLSV
LVLFIALQFANFLMGDVIGPIWYQL
>Mature_185_residues
MNAMSFLISTLFDLYIMVVILRIWLQAARADFYNPFSQFIVKATQPVIGPLRRVIPSIGSIDLATVLFAYVLCVLKFVAL
ILIASSGSVTFSADFLYLGLLSLVKAAGGLLFWVLLIRAILSWVSQGRSPIEYVFHQLTEPMLAPIRRILPAMGGFDLSV
LVLFIALQFANFLMGDVIGPIWYQL

Specific function: Unknown

COG id: COG0762

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yggT family [H]

Homologues:

Organism=Escherichia coli, GI1789322, Length=178, Percent_Identity=55.6179775280899, Blast_Score=193, Evalue=7e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003425 [H]

Pfam domain/function: PF02325 YGGT [H]

EC number: NA

Molecular weight: Translated: 20577; Mature: 20577

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAMSFLISTLFDLYIMVVILRIWLQAARADFYNPFSQFIVKATQPVIGPLRRVIPSIGS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCC
IDLATVLFAYVLCVLKFVALILIASSGSVTFSADFLYLGLLSLVKAAGGLLFWVLLIRAI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSWVSQGRSPIEYVFHQLTEPMLAPIRRILPAMGGFDLSVLVLFIALQFANFLMGDVIGP
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IWYQL
HHHCC
>Mature Secondary Structure
MNAMSFLISTLFDLYIMVVILRIWLQAARADFYNPFSQFIVKATQPVIGPLRRVIPSIGS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCC
IDLATVLFAYVLCVLKFVALILIASSGSVTFSADFLYLGLLSLVKAAGGLLFWVLLIRAI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSWVSQGRSPIEYVFHQLTEPMLAPIRRILPAMGGFDLSVLVLFIALQFANFLMGDVIGP
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IWYQL
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8982386 [H]