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The map label for this gene is yggU [C]

Identifier: 27364893

GI number: 27364893

Start: 1496277

End: 1496567

Strand: Reverse

Name: yggU [C]

Synonym: VV1_1522

Alternate gene names: 27364893

Gene position: 1496567-1496277 (Counterclockwise)

Preceding gene: 27364894

Following gene: 27364892

Centisome position: 45.6

GC content: 46.39

Gene sequence:

>291_bases
ATGAGCCAAACGGTTTGGCTTGATGGTGAGGATGTAGTGCTTCGTCTCTACATCCAACCCAAAGCAAGTCGTGATAAAAT
CCTTGGCTTGCATGGTGATGAACTGAAAATTGCCATCACCGCGCCCCCCGTCGATGGGAAAGCAAATGGGCATTTAACCA
AGTTACTGGGTAAGTGGTTTAAAGTTGCTAAAAGTCTGGTCACGATAGAAAAAGGAGAACTCGGACGGCACAAACAAGTG
CGTGTTCACACTCCACAACAAATACCAGACGAAGTGAAAGCCATCTTGTGA

Upstream 100 bases:

>100_bases
TGGGGGGCTTTGACTTAAGCGTGCTGGTGCTGTTCATCGCTCTGCAATTTGCCAACTTCCTGATGGGCGATGTGATTGGC
CCGATTTGGTATCAGTTGTA

Downstream 100 bases:

>100_bases
TGGCTTTTTGTTTACCGCCAATAACGAGTAAGGAAGTCTACAATGAACAAATGGATGGTTGCGTTACTGAGTTGCCTGAT
GGCCCTACCAACATGGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MSQTVWLDGEDVVLRLYIQPKASRDKILGLHGDELKIAITAPPVDGKANGHLTKLLGKWFKVAKSLVTIEKGELGRHKQV
RVHTPQQIPDEVKAIL

Sequences:

>Translated_96_residues
MSQTVWLDGEDVVLRLYIQPKASRDKILGLHGDELKIAITAPPVDGKANGHLTKLLGKWFKVAKSLVTIEKGELGRHKQV
RVHTPQQIPDEVKAIL
>Mature_95_residues
SQTVWLDGEDVVLRLYIQPKASRDKILGLHGDELKIAITAPPVDGKANGHLTKLLGKWFKVAKSLVTIEKGELGRHKQVR
VHTPQQIPDEVKAIL

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family

Homologues:

Organism=Escherichia coli, GI87082189, Length=94, Percent_Identity=67.0212765957447, Blast_Score=137, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1522_VIBVU (Q8DCB7)

Other databases:

- EMBL:   AE016795
- RefSeq:   NP_760421.1
- ProteinModelPortal:   Q8DCB7
- SMR:   Q8DCB7
- GeneID:   1178437
- GenomeReviews:   AE016795_GR
- KEGG:   vvu:VV1_1522
- HOGENOM:   HBG472132
- OMA:   KASRDKI
- ProtClustDB:   PRK05090
- BioCyc:   VVUL216895:VV1_1522-MONOMER
- HAMAP:   MF_00634
- InterPro:   IPR005228
- InterPro:   IPR003746
- Gene3D:   G3DSA:3.30.1200.10
- TIGRFAMs:   TIGR00251

Pfam domain/function: PF02594 DUF167; SSF69786 DUF167

EC number: NA

Molecular weight: Translated: 10684; Mature: 10552

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTVWLDGEDVVLRLYIQPKASRDKILGLHGDELKIAITAPPVDGKANGHLTKLLGKWF
CCCEEEECCCCEEEEEEECCCCCCCCEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHH
KVAKSLVTIEKGELGRHKQVRVHTPQQIPDEVKAIL
HHHHHHHEEECCCCCCCCEEEEECCCCCCHHHHHCC
>Mature Secondary Structure 
SQTVWLDGEDVVLRLYIQPKASRDKILGLHGDELKIAITAPPVDGKANGHLTKLLGKWF
CCEEEECCCCEEEEEEECCCCCCCCEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHH
KVAKSLVTIEKGELGRHKQVRVHTPQQIPDEVKAIL
HHHHHHHEEECCCCCCCCEEEEECCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA