| Definition | Brucella suis 1330 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004310 |
| Length | 2,107,794 |
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The map label for this gene is hflX [H]
Identifier: 23501988
GI number: 23501988
Start: 1086368
End: 1087786
Strand: Reverse
Name: hflX [H]
Synonym: BR1110
Alternate gene names: 23501988
Gene position: 1087786-1086368 (Counterclockwise)
Preceding gene: 23501989
Following gene: 23501987
Centisome position: 51.61
GC content: 59.69
Gene sequence:
>1419_bases TTGTCCAAACCCAAGGATAAAAAAGCGGCATCCCTCGATGGCAGCAAGGGCTTTGCCCTTTCCGAGCCTGAGCCAACGAG AGCAGCCGTCATTGTTCCCGTCCTGCCGGACCGTTATAATAGCGGCTCTGCGGGCGAGGATGGCGCAAGATCGCAGTTCC AGCGTTCCAACGAGGCGCGCCTTGAGGAAGCGATCGGGCTTGCGCGCGCAATTGATCTTGATATCGAACATGCGGAAATC GCCATCGTCACCAATCCGCGGCCCGCGACGCTGCTTGGTGCGGGCAAGGCCCAATCCATTGCCGAAGTCGTCAAGGAAAA GGCGATTGGACTGGTGGTTGTCGATCATGCCCTGACGCCGGTGCAGCAGCGCAATCTTGAAAAGGAATGGAACGCCAAGG TCATCGACCGAACCGGGCTCATTCTGGAGATTTTCGGTGAACGCGCGCGCACCAAGGAAGGCGCGCTTCAGGTGGAGCTG GCGCATCTCAACTACCAGAAGGGACGCCTTGTCAGAAGCTGGACCCACCTTGAACGCCAGCGCGGCGGTGGGGGCTTCCT TGGCGGCCCGGGTGAAACCCAGATCGAAGCTGACCGACGCCTGCTTCAGGAAAAAATCCTGCGCATCAAGCGCGAGCTTG AAACCGTGGTGCGCACGCGCGCGCTGCATCGCCAGAAGCGGCGCAAGGTGCCGCATCCAATTGTTGCGCTTGTCGGCTAT ACCAATGCGGGAAAATCCACGCTTTTCAACCGCATGACGGGTGCGCAGGTGCTTGCGGAAGATATGCTTTTCGCCACGCT CGATCCGACCTTGCGCCGCATCCGGCTTCCCCATGGCGAAACGGTCATCCTGTCGGACACGGTGGGCTTTATTTCCAATC TGCCGCACCATCTCGTTGCCGCTTTCCGGGCAACGCTCGAAGAAGTGGTGGAGGCCGACCTGATCCTGCATGTCCGTGAT ATTTCCGACCCCGACAACGCGGCGCAGGCCGAGGATGTGGAGAATATTCTGGCTGGTCTCGGTATCGAGCCGCAGGACCA TGCCCGCGTCGTGGAGGTCTGGAACAAGATCGGCAATCTCGACGAAAGTGCGCGTGAGGCAGCCTTGCGCCTTGCCGCCG CCGGAAGCGAGGAGGGGCGCCCGATCCCTGTTTCGGCTATCACCGGTGAAGGCGTTGACAGGTTGCTTTCGCTTATCGAA ACACGGATAGCAGGTGCGCTTGGATCGGTCGATCTGGTGCTTTCGCCTTTCGATCTGCATCTTCTCGACTGGATTTACCA GCACGGCAGCGATGTTCAGCGTGAAAACCTTGAAGACGGTTCGGTTCGCATCAAGGCGCGGCTGACCGAAATCGCCCGCA GGATGCTGGACGAAAAGCGCGGCATCCGGCCTGAAAAGCCTGAGATCGATTGGGAGTAG
Upstream 100 bases:
>100_bases ATTGCTTGAACGTTCCGGGGCGTCTTCATTTGAAACAGCTTACGCGGTGACTTATCTGCAAGGCAGATCCATGCGTTCCC GCGTCCCCGGAGAATATTAC
Downstream 100 bases:
>100_bases GCGGATATTTCGCGCCACTTGCGGAACAGGGGCGCAACGCCCTATGTATGGAAGTCCGACGATTCAACCTAGTCATATCG CCATTAATATATCAGAGGCC
Product: GTP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MSKPKDKKAASLDGSKGFALSEPEPTRAAVIVPVLPDRYNSGSAGEDGARSQFQRSNEARLEEAIGLARAIDLDIEHAEI AIVTNPRPATLLGAGKAQSIAEVVKEKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGALQVEL AHLNYQKGRLVRSWTHLERQRGGGGFLGGPGETQIEADRRLLQEKILRIKRELETVVRTRALHRQKRRKVPHPIVALVGY TNAGKSTLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVVEADLILHVRD ISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIGNLDESAREAALRLAAAGSEEGRPIPVSAITGEGVDRLLSLIE TRIAGALGSVDLVLSPFDLHLLDWIYQHGSDVQRENLEDGSVRIKARLTEIARRMLDEKRGIRPEKPEIDWE
Sequences:
>Translated_472_residues MSKPKDKKAASLDGSKGFALSEPEPTRAAVIVPVLPDRYNSGSAGEDGARSQFQRSNEARLEEAIGLARAIDLDIEHAEI AIVTNPRPATLLGAGKAQSIAEVVKEKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGALQVEL AHLNYQKGRLVRSWTHLERQRGGGGFLGGPGETQIEADRRLLQEKILRIKRELETVVRTRALHRQKRRKVPHPIVALVGY TNAGKSTLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVVEADLILHVRD ISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIGNLDESAREAALRLAAAGSEEGRPIPVSAITGEGVDRLLSLIE TRIAGALGSVDLVLSPFDLHLLDWIYQHGSDVQRENLEDGSVRIKARLTEIARRMLDEKRGIRPEKPEIDWE >Mature_471_residues SKPKDKKAASLDGSKGFALSEPEPTRAAVIVPVLPDRYNSGSAGEDGARSQFQRSNEARLEEAIGLARAIDLDIEHAEIA IVTNPRPATLLGAGKAQSIAEVVKEKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGALQVELA HLNYQKGRLVRSWTHLERQRGGGGFLGGPGETQIEADRRLLQEKILRIKRELETVVRTRALHRQKRRKVPHPIVALVGYT NAGKSTLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVVEADLILHVRDI SDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIGNLDESAREAALRLAAAGSEEGRPIPVSAITGEGVDRLLSLIET RIAGALGSVDLVLSPFDLHLLDWIYQHGSDVQRENLEDGSVRIKARLTEIARRMLDEKRGIRPEKPEIDWE
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133118, Length=302, Percent_Identity=34.4370860927152, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI310133116, Length=287, Percent_Identity=34.8432055749129, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI310124269, Length=271, Percent_Identity=35.4243542435424, Blast_Score=142, Evalue=9e-34, Organism=Homo sapiens, GI310124267, Length=271, Percent_Identity=35.4243542435424, Blast_Score=142, Evalue=9e-34, Organism=Homo sapiens, GI310124171, Length=271, Percent_Identity=35.4243542435424, Blast_Score=142, Evalue=9e-34, Organism=Homo sapiens, GI310124169, Length=271, Percent_Identity=35.4243542435424, Blast_Score=142, Evalue=9e-34, Organism=Escherichia coli, GI1790615, Length=390, Percent_Identity=47.1794871794872, Blast_Score=292, Evalue=3e-80, Organism=Caenorhabditis elegans, GI17561038, Length=344, Percent_Identity=33.4302325581395, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24650079, Length=408, Percent_Identity=31.8627450980392, Blast_Score=134, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 52023; Mature: 51892
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPKDKKAASLDGSKGFALSEPEPTRAAVIVPVLPDRYNSGSAGEDGARSQFQRSNEAR CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCHHHH LEEAIGLARAIDLDIEHAEIAIVTNPRPATLLGAGKAQSIAEVVKEKAIGLVVVDHALTP HHHHHHHHHHEECCCCCEEEEEEECCCCCEEEECCCHHHHHHHHHHHCCCEEEECCCCCC VQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGALQVELAHLNYQKGRLVRSWTHLERQ HHHHCCCHHCCCEEECCCCHHHEECCCHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH RGGGGFLGGPGETQIEADRRLLQEKILRIKRELETVVRTRALHRQKRRKVPHPIVALVGY CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC TNAGKSTLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVA CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCEEEEECCHHHHHCCHHHHHH AFRATLEEVVEADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIGNL HHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC DESAREAALRLAAAGSEEGRPIPVSAITGEGVDRLLSLIETRIAGALGSVDLVLSPFDLH CHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHH LLDWIYQHGSDVQRENLEDGSVRIKARLTEIARRMLDEKRGIRPEKPEIDWE HHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SKPKDKKAASLDGSKGFALSEPEPTRAAVIVPVLPDRYNSGSAGEDGARSQFQRSNEAR CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCHHHH LEEAIGLARAIDLDIEHAEIAIVTNPRPATLLGAGKAQSIAEVVKEKAIGLVVVDHALTP HHHHHHHHHHEECCCCCEEEEEEECCCCCEEEECCCHHHHHHHHHHHCCCEEEECCCCCC VQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGALQVELAHLNYQKGRLVRSWTHLERQ HHHHCCCHHCCCEEECCCCHHHEECCCHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH RGGGGFLGGPGETQIEADRRLLQEKILRIKRELETVVRTRALHRQKRRKVPHPIVALVGY CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC TNAGKSTLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVA CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCEEEEECCHHHHHCCHHHHHH AFRATLEEVVEADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIGNL HHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC DESAREAALRLAAAGSEEGRPIPVSAITGEGVDRLLSLIETRIAGALGSVDLVLSPFDLH CHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHH LLDWIYQHGSDVQRENLEDGSVRIKARLTEIARRMLDEKRGIRPEKPEIDWE HHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]