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The map label for this gene is ypmR [H]

Identifier: 23100504

GI number: 23100504

Start: 3164528

End: 3165457

Strand: Direct

Name: ypmR [H]

Synonym: OB3049

Alternate gene names: 23100504

Gene position: 3164528-3165457 (Clockwise)

Preceding gene: 23100503

Following gene: 23100505

Centisome position: 87.16

GC content: 33.66

Gene sequence:

>930_bases
ATGAAAAAAAAGAAGAAGATTTTTATTTTTAGCGGATTGATCGCATTGGTACTTCTTATGACAATTGGATTTATCTATCA
ATCTCAGGATCCATTTAAGGATCTTTCTTCCGACCAAAAAGAAAAAGAAACAGCACTACAAAAACAAGTAGATCAAAATA
AATCAAATAATCAACAAGACCACTCCAATGACGAAACAGCTAATGGGAATGTAGAAGCTGAGGAAGCATCTACACGCTCC
TTTCCCAAAGTTATCAATGATGCCGTACAGGGTACAATGGACTTTTTATCTACAAATGAAACACAAATCGTTGCCGTCGG
CGATTCACTAACACAAGGCGTTGGTGATGAAACCGAACAAGGTGGTTATGTTGGAATACTTGACAGAACAATAAATAGTA
CTGGATATAGTGCTGAATTTAACAACTTTGGAAAACGAGGTAACCGTACAGATCAACTTCTCCAACGATTACGAAATGAA
CAAGATTTGATTGACTCCATACAAAAGTCAGATATTGTTTTAGTAACTATTGGTGCAAATGATATTATGCAAGTGGTTAA
GGAAAATATCACAAACTTAGATATTAATGACTTTCAAGTAGAACAAGTTCATTATGAGCAAAGGCTACAAGACATTTTCA
CTGAGATTCGGGAAATTAATCCCGATTCTTATATCTATTTAGTAGGAATTTATAATCCTTTTAAAAATTATTTCGAAAAC
ATCCAAGAACTTGATATGATCGTTAGCGACTGGAACGATACTGGCGTCAGTATAACAGATGAATATGAAAACAGTACCTT
CATACCTATTGAAGATTTATTTAATGATACAAATAATATTAACCTATATGCCGACGACAATTTTCACCCGAACTACGAAG
GGTATTATAGAATTGCAGAACGAGTATTAAATTATATGTCGATTAGATAA

Upstream 100 bases:

>100_bases
AACTGTTATTATAATAATCCATCTACATCAGCCTTCTAAATAGACAAATCCATTTACTCATTCATAATATATAAGAAAAG
AACTGCATAGGTGTGATTAC

Downstream 100 bases:

>100_bases
GGATGAACATAATGAGAGAACGATTAAAAAGACTAAAAATGAAAAACAAGTGGAAAAAACTTTTCCTAGGGCTACTTGCC
TTAAATATGCTTTTGATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKKKKKIFIFSGLIALVLLMTIGFIYQSQDPFKDLSSDQKEKETALQKQVDQNKSNNQQDHSNDETANGNVEAEEASTRS
FPKVINDAVQGTMDFLSTNETQIVAVGDSLTQGVGDETEQGGYVGILDRTINSTGYSAEFNNFGKRGNRTDQLLQRLRNE
QDLIDSIQKSDIVLVTIGANDIMQVVKENITNLDINDFQVEQVHYEQRLQDIFTEIREINPDSYIYLVGIYNPFKNYFEN
IQELDMIVSDWNDTGVSITDEYENSTFIPIEDLFNDTNNINLYADDNFHPNYEGYYRIAERVLNYMSIR

Sequences:

>Translated_309_residues
MKKKKKIFIFSGLIALVLLMTIGFIYQSQDPFKDLSSDQKEKETALQKQVDQNKSNNQQDHSNDETANGNVEAEEASTRS
FPKVINDAVQGTMDFLSTNETQIVAVGDSLTQGVGDETEQGGYVGILDRTINSTGYSAEFNNFGKRGNRTDQLLQRLRNE
QDLIDSIQKSDIVLVTIGANDIMQVVKENITNLDINDFQVEQVHYEQRLQDIFTEIREINPDSYIYLVGIYNPFKNYFEN
IQELDMIVSDWNDTGVSITDEYENSTFIPIEDLFNDTNNINLYADDNFHPNYEGYYRIAERVLNYMSIR
>Mature_309_residues
MKKKKKIFIFSGLIALVLLMTIGFIYQSQDPFKDLSSDQKEKETALQKQVDQNKSNNQQDHSNDETANGNVEAEEASTRS
FPKVINDAVQGTMDFLSTNETQIVAVGDSLTQGVGDETEQGGYVGILDRTINSTGYSAEFNNFGKRGNRTDQLLQRLRNE
QDLIDSIQKSDIVLVTIGANDIMQVVKENITNLDINDFQVEQVHYEQRLQDIFTEIREINPDSYIYLVGIYNPFKNYFEN
IQELDMIVSDWNDTGVSITDEYENSTFIPIEDLFNDTNNINLYADDNFHPNYEGYYRIAERVLNYMSIR

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013830
- InterPro:   IPR013831
- InterPro:   IPR001087 [H]

Pfam domain/function: PF00657 Lipase_GDSL [H]

EC number: NA

Molecular weight: Translated: 35422; Mature: 35422

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKKKIFIFSGLIALVLLMTIGFIYQSQDPFKDLSSDQKEKETALQKQVDQNKSNNQQD
CCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCC
HSNDETANGNVEAEEASTRSFPKVINDAVQGTMDFLSTNETQIVAVGDSLTQGVGDETEQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCCC
GGYVGILDRTINSTGYSAEFNNFGKRGNRTDQLLQRLRNEQDLIDSIQKSDIVLVTIGAN
CCEEEEEEHHHCCCCCCCHHHHHCCCCCCHHHHHHHHCCHHHHHHHHCCCCEEEEEECCH
DIMQVVKENITNLDINDFQVEQVHYEQRLQDIFTEIREINPDSYIYLVGIYNPFKNYFEN
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHH
IQELDMIVSDWNDTGVSITDEYENSTFIPIEDLFNDTNNINLYADDNFHPNYEGYYRIAE
HHHHHHHHHCCCCCCCEEEECCCCCEEEEHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH
RVLNYMSIR
HHHHHHCCC
>Mature Secondary Structure
MKKKKKIFIFSGLIALVLLMTIGFIYQSQDPFKDLSSDQKEKETALQKQVDQNKSNNQQD
CCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCC
HSNDETANGNVEAEEASTRSFPKVINDAVQGTMDFLSTNETQIVAVGDSLTQGVGDETEQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCCC
GGYVGILDRTINSTGYSAEFNNFGKRGNRTDQLLQRLRNEQDLIDSIQKSDIVLVTIGAN
CCEEEEEEHHHCCCCCCCHHHHHCCCCCCHHHHHHHHCCHHHHHHHHCCCCEEEEEECCH
DIMQVVKENITNLDINDFQVEQVHYEQRLQDIFTEIREINPDSYIYLVGIYNPFKNYFEN
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHH
IQELDMIVSDWNDTGVSITDEYENSTFIPIEDLFNDTNNINLYADDNFHPNYEGYYRIAE
HHHHHHHHHCCCCCCCEEEECCCCCEEEEHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH
RVLNYMSIR
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 3145906 [H]