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The map label for this gene is ypmS [H]

Identifier: 23100505

GI number: 23100505

Start: 3165469

End: 3166134

Strand: Direct

Name: ypmS [H]

Synonym: OB3050

Alternate gene names: 23100505

Gene position: 3165469-3166134 (Clockwise)

Preceding gene: 23100504

Following gene: 23100507

Centisome position: 87.19

GC content: 33.63

Gene sequence:

>666_bases
ATGAGAGAACGATTAAAAAGACTAAAAATGAAAAACAAGTGGAAAAAACTTTTCCTAGGGCTACTTGCCTTAAATATGCT
TTTGATAATTATCGTTCTTTCCCTCATCTTTTGGCCTGTATCAAATAATGAGTACCCTTCATCCGATGATATCGATGAAC
AGGAAAGTTCGGAATTTATTATTCGTACGACAAAGCAAAATTTAAATAATTTAGTAAATGCATATATAGAAAAATTACTT
GAAGGCACCAATCATCATTATCGTATTGCGCTTGAAGAAGATGTACATTTAATGGGTGAGCTACCTGTATTCTCTTCAAC
GGTACCACTGTCAGTTAGACTTGAACCACTAGTCCAACCGAACGGAGATCTGATACTCAAACAAAAATCAATATCTGTTG
GGTTATTAGAGCTACCAAACAAGAAAATAATGGAATATATGGGAAGATATTTACCAATGCCAGAATGGGTTACGATTAAC
CCAGAAGAACAAGAAATCTATGTAGCAATTACGGAAATGGATATACAAGGAAACTTTCAAGTATCTGCGGAAAACATTGA
TCTAGAAGCAAATAATATTGCTCTTAAATTAAATGTGCCTTATGAAACACTTGGTATTCAGCATTTAAACTCAGAATCAT
TACGAGGATTTTATGAGGAAGACTAA

Upstream 100 bases:

>100_bases
ACCTATATGCCGACGACAATTTTCACCCGAACTACGAAGGGTATTATAGAATTGCAGAACGAGTATTAAATTATATGTCG
ATTAGATAAGGATGAACATA

Downstream 100 bases:

>100_bases
TAAGTGAATTTAATCATCGGGGACCATTTTTCCCTAGTTAAATGCTTACTGCTGCTTTCGTGAAGGATAAAAAAACCTGT
GTTTTGGATTATTTATATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRERLKRLKMKNKWKKLFLGLLALNMLLIIIVLSLIFWPVSNNEYPSSDDIDEQESSEFIIRTTKQNLNNLVNAYIEKLL
EGTNHHYRIALEEDVHLMGELPVFSSTVPLSVRLEPLVQPNGDLILKQKSISVGLLELPNKKIMEYMGRYLPMPEWVTIN
PEEQEIYVAITEMDIQGNFQVSAENIDLEANNIALKLNVPYETLGIQHLNSESLRGFYEED

Sequences:

>Translated_221_residues
MRERLKRLKMKNKWKKLFLGLLALNMLLIIIVLSLIFWPVSNNEYPSSDDIDEQESSEFIIRTTKQNLNNLVNAYIEKLL
EGTNHHYRIALEEDVHLMGELPVFSSTVPLSVRLEPLVQPNGDLILKQKSISVGLLELPNKKIMEYMGRYLPMPEWVTIN
PEEQEIYVAITEMDIQGNFQVSAENIDLEANNIALKLNVPYETLGIQHLNSESLRGFYEED
>Mature_221_residues
MRERLKRLKMKNKWKKLFLGLLALNMLLIIIVLSLIFWPVSNNEYPSSDDIDEQESSEFIIRTTKQNLNNLVNAYIEKLL
EGTNHHYRIALEEDVHLMGELPVFSSTVPLSVRLEPLVQPNGDLILKQKSISVGLLELPNKKIMEYMGRYLPMPEWVTIN
PEEQEIYVAITEMDIQGNFQVSAENIDLEANNIALKLNVPYETLGIQHLNSESLRGFYEED

Specific function: Unknown

COG id: COG4698

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018672 [H]

Pfam domain/function: PF09911 DUF2140 [H]

EC number: NA

Molecular weight: Translated: 25557; Mature: 25557

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRERLKRLKMKNKWKKLFLGLLALNMLLIIIVLSLIFWPVSNNEYPSSDDIDEQESSEFI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEE
IRTTKQNLNNLVNAYIEKLLEGTNHHYRIALEEDVHLMGELPVFSSTVPLSVRLEPLVQP
EEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCCCCCCEEEEEEEEECC
NGDLILKQKSISVGLLELPNKKIMEYMGRYLPMPEWVTINPEEQEIYVAITEMDIQGNFQ
CCCEEEEECCCEEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEEEEECCCEE
VSAENIDLEANNIALKLNVPYETLGIQHLNSESLRGFYEED
EEECEEEEEECCEEEEEECCHHHHCCEECCHHHHCCCCCCC
>Mature Secondary Structure
MRERLKRLKMKNKWKKLFLGLLALNMLLIIIVLSLIFWPVSNNEYPSSDDIDEQESSEFI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEE
IRTTKQNLNNLVNAYIEKLLEGTNHHYRIALEEDVHLMGELPVFSSTVPLSVRLEPLVQP
EEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCCCCCCEEEEEEEEECC
NGDLILKQKSISVGLLELPNKKIMEYMGRYLPMPEWVTINPEEQEIYVAITEMDIQGNFQ
CCCEEEEECCCEEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEEEEECCCEE
VSAENIDLEANNIALKLNVPYETLGIQHLNSESLRGFYEED
EEECEEEEEECCEEEEEECCHHHHCCEECCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]