Click here to switch to the map view.

The map label for this gene is atpF

Identifier: 23100434

GI number: 23100434

Start: 3089834

End: 3090361

Strand: Reverse

Name: atpF

Synonym: OB2979

Alternate gene names: 23100434

Gene position: 3090361-3089834 (Counterclockwise)

Preceding gene: 23100435

Following gene: 23100433

Centisome position: 85.12

GC content: 38.26

Gene sequence:

>528_bases
GTGCATTCATACATTGACTTGTTAAACATTGGAGCTAGTGTCGGTGGTTTACGTTGGCCAGATATGTTAGTTCAATTATT
CTTCTTCCTTATTCTTCTAGCATTACTGAAGAAATTTGCTTGGGGACCATTAATGAGCAAAATGGAAGAGCGTGAGAACT
ACGTAGCAAATGAAATTGAATCAGCTGAGCAAAGTCGTGCGGAAGCAGAAAAGGCTTCCAAAGATGCAGCTGAGCAATTA
AATCAAGTAAAAGCAGAAGCGCAAAAAATGATAGAAGATGCGAAGGCTGCAGGAGCAAAACAAGAGCAAGCCATCATCGA
TTCAGCGAGGGAAGAAGCAGATCGTATTAAAGAAGCAGCGCAAGCAGATATTCAAAATGAAAAAGAACGAGCTATTCAAG
CGTTACAAGATAAAGTTGCATCCTTATCTGTATTAATTGCAAGTAAGGTAATTGAAAAAGAACTTAGCGAACAAGATCAA
GAAAAACTAATTAATGAATACATTCAAGAAGTTGGGGAAGATCGATGA

Upstream 100 bases:

>100_bases
GTAACAAAGAATCTTCGCCATTCCTTTATGCAAGAGTAACGATGTAGAATTTTATACATCAGACCATAGATGTGATTTAT
TAGCGAAAGGAGTGGGATCG

Downstream 100 bases:

>100_bases
GTAACTCCGTAGTAGCAAAACGTTATGCAGATGCGCTTTTTCAGCTTGGTAGAGAGAAGAATTCATTAGACCAATTAGTA
GCAGATTTTCTTGAGGTTCG

Product: H(+)-transporting ATP synthase B chain

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MHSYIDLLNIGASVGGLRWPDMLVQLFFFLILLALLKKFAWGPLMSKMEERENYVANEIESAEQSRAEAEKASKDAAEQL
NQVKAEAQKMIEDAKAAGAKQEQAIIDSAREEADRIKEAAQADIQNEKERAIQALQDKVASLSVLIASKVIEKELSEQDQ
EKLINEYIQEVGEDR

Sequences:

>Translated_175_residues
MHSYIDLLNIGASVGGLRWPDMLVQLFFFLILLALLKKFAWGPLMSKMEERENYVANEIESAEQSRAEAEKASKDAAEQL
NQVKAEAQKMIEDAKAAGAKQEQAIIDSAREEADRIKEAAQADIQNEKERAIQALQDKVASLSVLIASKVIEKELSEQDQ
EKLINEYIQEVGEDR
>Mature_175_residues
MHSYIDLLNIGASVGGLRWPDMLVQLFFFLILLALLKKFAWGPLMSKMEERENYVANEIESAEQSRAEAEKASKDAAEQL
NQVKAEAQKMIEDAKAAGAKQEQAIIDSAREEADRIKEAAQADIQNEKERAIQALQDKVASLSVLIASKVIEKELSEQDQ
EKLINEYIQEVGEDR

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

Organism=Escherichia coli, GI1790174, Length=168, Percent_Identity=31.547619047619, Blast_Score=77, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_OCEIH (Q8EM79)

Other databases:

- EMBL:   BA000028
- RefSeq:   NP_693901.1
- GeneID:   1017926
- GenomeReviews:   BA000028_GR
- KEGG:   oih:OB2979
- NMPDR:   fig|221109.1.peg.2982
- HOGENOM:   HBG617328
- OMA:   NPGLIFW
- BioCyc:   OIHE221109:OB2979-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 19649; Mature: 19649

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10d7a1f4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSYIDLLNIGASVGGLRWPDMLVQLFFFLILLALLKKFAWGPLMSKMEERENYVANEIE
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
SAEQSRAEAEKASKDAAEQLNQVKAEAQKMIEDAKAAGAKQEQAIIDSAREEADRIKEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
QADIQNEKERAIQALQDKVASLSVLIASKVIEKELSEQDQEKLINEYIQEVGEDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MHSYIDLLNIGASVGGLRWPDMLVQLFFFLILLALLKKFAWGPLMSKMEERENYVANEIE
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
SAEQSRAEAEKASKDAAEQLNQVKAEAQKMIEDAKAAGAKQEQAIIDSAREEADRIKEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
QADIQNEKERAIQALQDKVASLSVLIASKVIEKELSEQDQEKLINEYIQEVGEDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12235376